The eyes were enucleated at 1, 3, 7, 14, 21, and 28 days after laser photocoagulation (four rats at each time point). Control animals were four nonlasered rats. To remove the vitreous, eyes were bisected posterior to the iris, the lens was lifted out, and the vitreous removed and placed in tubes (Eppendorf; Brinkman Instruments, Westbury, NY) on ice after careful examination and dissection to remove any contaminating material. Rat vitreous from both eyes was pooled, and volume was measured by pipette aspiration. Next, vitreous was quickly homogenized with ice-cold lysis buffer (pH 7.5) containing 10 mM Tris, 130 mM NaCl, 1% Triton X-100, 10 mM NaF, 10 mM NaPi, 10 mM NaPPi, 16 μg/mL benzamidine, 10 μg/mL phenanthrolene, 10 μg/mL aprotinin, 10 μg/mL leupeptin, 10 μg/mL pepstatin, and 4 mM 4-(2-aminoethyl)-benzenesulfonyl fluoride (AEBSF). An aliquot was removed for protein quantitation using a bicinchoninic acid (BCA) protein assay (Pierce, Rockford, IL), and the rest of the supernatant was stored at −70°C for future analysis of PEDF levels.
Electrophoresis of proteins was performed with 12% SDS-polyacrylamide gels. All samples were boiled in denaturing sample buffer, and equal amounts of proteins were loaded on each lane. Proteins were separated at room temperature under reducing conditions at 120 V for 1 hour. Western blot transfer of separated proteins was performed at room temperature, using polyvinylidene difluoride membranes at 50 mA for 1 hour. To verify equal protein loading, blots were stained with 0.1% ponceau red (Sigma, St. Louis, MO) diluted in 5% acetic acid. Afterward, blots were blocked for 1 hour in TBS (10 mM Tris-HCl [pH 7.5], 150 mM NaCl) containing 5% nonfat dried milk. Next, the membranes were probed with a 1:250 dilution of primary antibody in TBS containing 2.5% nonfat dried milk for 1.5 hours. Rabbit polyclonal antibody against PEDF (anti-EPC-1) was a generous donation of Vincent J. Cristafalo and Mary K. Francis (Lankenau Medical Research Center, Wynnewood, PA). After incubation with primary antibody, the blots were washed for 30 minutes with frequent changes of TBS and blocked in 1% nonfat dried milk in TBS for 30 minutes, followed by incubation in a peroxidase-coupled secondary antibody for 1 hour in TBS containing 1% nonfat dried milk. The blots were washed for 1 hour with frequent changes of TBST (TBS with 0.1% Tween). Immunoblot analysis was performed using enhanced chemiluminescence with Western blot detection reagents (Amersham, Piscataway, NJ) followed by exposure to autoradiograph film (ML; Eastman Kodak, Rochester, NY). Blots were analyzed by densitometry on computer (ImageQuant software; Molecular Dynamics, Inc., Sunnyvale, CA). Amount of PEDF expressed in arbitrary units (AU) was normalized to the total amount of protein per sample. Data were plotted as AU PEDF per microliter vitreous versus time point.