Purified BDNF, NGF (Serotec, Oxford, UK), NT-3 (Peprotec, Rocky
Hill, NJ), and NT-4 (Regeneron, Tarrytown, NY) were used as NT
standards, and rainbow markers (Amersham Pharmacia Biotech) were used
as the molecular weight markers. The electrophoresis samples were
prepared as follows. The retinas were removed from the posterior halves
of the eyeballs under a dissecting microscope. They were then washed
twice with ice-cold phosphate-buffered saline (PBS) and immediately
homogenized in lysis buffer (50 mM Tris–HCl, pH 7.5, containing 1%
NP-40, 150 mM sodium chloride, 2.5 mM ethyleneglycol bis[
2-aminoethylether] tetraacetic acid [EGTA], 0.14 U/ml aprotinin, 1
mM phenylmethylsulfonyl fluoride, 2 mM sodium vanadate, and 50 mM
sodium fluoride). Homogenates were spun at 10,000g for 10
minutes, and the supernatant fractions were collected. Electrophoresis
was performed on 12.5% sodium dodecyl sulfate–polyacrylamide gels
(12.5 μg protein/lane) and blotted on Hybond–ECL filters (Amersham
Pharmacia Biotech). The membranes were incubated for 48 hours at 4°C
with the anti-BDNF antibody diluted 1:500 in 0.1% Tween-20–PBS
(T–PBS) or 24 hours at 4°C with a polyclonal antibody against
calretinin (Chemicon International, Temecula, CA) diluted 1:3000 in
T–PBS. After washing with T–PBS, the membranes were incubated with
horseradish peroxidase–linked anti-rabbit immunoglobulins (Amersham
Pharmacia Biotech) diluted 1:500, for 60 minutes at room temperature.
After washing with T–PBS, the bands were visualized using
chemiluminescence according to the manufacturer’s protocol (ECL
detection kits; Amersham Pharmacia Biotech). To assess the specificity
of the anti-BDNF antibody, neurotrophic factors (0.1 μg) were loaded
onto duplicate sodium dodecyl sulfate–polyacrylamide gels. One gel was
subjected to western blot analysis, and the other was silver stained
(Daiichi Kagaku, Tokyo, Japan) to visualize the loaded proteins.