Proteoglycans separated by Sepharose CL-4B chromatography and
isolated by DEAE chromatography were characterized by Western blot
analyses using antisera generated against human aggrecan (generously
provided by Robin Poole, Joint Diseases Laboratory, McGill University,
Montreal, Quebec, Canada), antisera against a peptide of human biglycan
(generously supplied by Peter Roughly, Joint Diseases Laboratory,
McGill University), antisera against a synthetic peptide containing the
exon 5 sequence of human decorin (generously supplied by David
McQuillan, Center for Extracellular Matrix Biology, Texas A&M
University, Houston), and antibodies against a synthetic peptide in the
G1 region of aggrecan (generously supplied by John Sandy, Biochemistry
Section, Shriner’s Hospital for Children, Tampa, FL).
Proteoglycan fractions were digested with chondroitinase ABC,
endo-β-galactosidase, and/or keratanase II (Seikagaku America,
Ijamsville, MD),
7 electrophoresed on 5% or 10% sodium
dodecyl sulfate (SDS)–polyacrylamide gels, transferred to
nitrocellulose, reacted with antibodies to the proteoglycan core
proteins, and detected with chemiluminescent substrate (Western Star;
Tropix, Bedford, MA). Digitized images of the Western blot analysis
were obtained using a flatbed scanner, and densitometry was performed
by computer (Image ver. 1.61; National Institutes of Health, Bethesda,
MD).
35SO
4-labeled
proteoglycan core proteins were visualized after digestion with
chondroitinase ABC and endo-β-galactosidase, separation on 5%
SDS-polyacrylamide gels, and fluorography to detect the presence of
35SO
4 on the residual
glycosaminoglycan stubs that remained attached to the proteoglycan core
proteins.