ROS membranes were isolated according to the procedures described
by Papermaster and Dreyer,
26 with minor modifications to
accommodate the smaller amounts of tissue in this study. Human retinal
tissue to be used for ROS preparations consisted of either the
perifoveal or the peripheral regions from a particular donor (tissue
from corresponding regions of the left and right eyes was pooled as
described above). Portions of frozen bovine retina were thawed in the
dark and approximately 1.0 to 1.2 g wet weight was used for ROS
membrane preparation. Samples were suspended by vigorous vortexing for
2 minutes in 2 ml of a homogenizing medium of 34% sucrose (density of
1.15 g/ml) containing 65 mM NaCl, 2 mM MgCl
2, and
5 mM Tris buffer (pH 7.4). This step sheared off most of the ROS into
the homogenizing medium, and the remaining retina was pelleted by
centrifugation at 5000 rpm for 5 minutes. After collecting the
supernatant (crude ROS), the pellet was resuspended with 2 ml of fresh
sucrose homogenizing medium, and the steps to obtain crude ROS were
repeated to maximize their yield. The supernatants of crude ROS were
then combined and centrifuged at 15,000 rpm for 30 minutes with twice
the volume of 10 mM Tris buffer (pH 7.4). This pellet was suspended in
2 ml of sucrose, density of 1.100 g/ml, containing 1 mM
MgCl
2 and 10 mM Tris buffer, pH 7.4, and layered
on top of a discontinuous sucrose gradient consisting of incremental 2
ml steps of 1.150, 1.130, and 1.110 g/ml, buffered with 10 mM Tris
buffer (pH 7.4) and 1 mM MgCl
2. The resultant
gradient was centrifuged at 25,000 rpm for 1 hour, and the band
containing purified ROS, which appeared at the 1.110/1.130 g/ml
interface, was collected. All the remaining bands were combined in a
manner similar to that described by Fliesler et al.
27 and
were in turn combined with the membrane pellet from the earlier crude
ROS isolation steps. This represented the “residual retina”
membrane fraction. The results of other studies (see discussion in
Ref. 28 ) suggest that cone outer segment membranes are enriched at the
1.130/1.15 g/ml interface rather than at 1.110/1.130 g/ml (containing
the ROS membranes) and would therefore represent a small fraction of
the residual membranes. The ROS and residual retina membrane fractions
were then washed by adding approximately 10 ml of 10 mM Tris buffer (pH
7.4) and centrifuging at 15,000 rpm for 30 minutes. The resulting
pellets were reconstituted in 0.5 to 2 ml of 10 mM Tris buffer (pH 7.4)
and frozen at −70°C for subsequent analysis. Tissue processed in
this manner yielded approximately 540 to 660 μg of ROS membrane
protein, and approximately 5.8 to 7.6 mg of residual, per pair of human
retinas. For the samples from the perifoveal retinal region,
corresponding yields were approximately 32 to 53 μg of ROS, and
approximately 420 to 610 μg of residual retinal membrane protein. The
purity of membrane preparations was evaluated routinely by sodium
dodecyl sulfate—polyacrylamide gel electrophoresis (SDS–PAGE)
according to the method of Laemmli,
29 and protein yields
were determined by the BCA protein assay (Pierce Chemical, Rockford,
IL).