The human BDNF gene was amplified by primers, 5′-CAGGTGAGAAGAGTGATGACC-3′ and 5′-CATAAATCCACTATCTTCCCC-3′, from the human brain cDNA library (BD- Clontech, Palo Alto, CA). The amplified products of polymerase chain reaction (PCR) were subcloned into the T-vector (Stratagene, La Jolla, CA), and the sequences were confirmed.
25
The cDNA was subcloned into the ClaI/EcoRI site of the AAV2 vector (AAV Helper-Free System; Stratagene) that lacked the replication (rep) gene, the capsid (cap) gene, and the flanking AAV2 inverted terminal repeats (ITR). A plasmid helper vector (pHelper) with the E2A, E4, and VA RNA genes was supplied by Stratagene. The rep and cap genes were also supplied as plasmid pAAV-RC vectors by Stratagene.
The constructed virus vectors and helper plasmids were cotransfected into human embryonic kidney (HEK293) cells expressing the E1A and E1B adenovirus genes, and the recombinant AAV2-BDNF gene (AAV2-BDNF) was collected by freeze–thaw cycles. Then the crude AAV2-BDNF was purified by a modification of the method of Auricchio et al.
26 Crude lysates were incubated with 1 mg each of DNase1 and RNaseA, followed by centrifugation at 4°C. The supernatant was incubated with 0.5% deoxycholic acid (Sigma-Aldrich, St. Louis, MO) for 30 minutes at 37°C. The crude viral particles were passed sequentially through a 5-μm and then an 0.8-μm pore filter (Millipore, Bedford, MA), and then applied to a heparin column equilibrated with 25 mL of PBS-MK buffer (1× phosphate-buffered saline [PBS], 1 mM MgCl
2, and 2.5 mM KCl) according to the manufacturer’s instructions (Sigma-Aldrich). The crude viral particles were applied to a column, and the matrix was washed with 25 mL of PBS-MK buffer, followed by elution with 20 mL of PBS-MK buffer containing 1 M NaCl.
27 To adjust the NaCl concentration to physiological levels, 10× PBS was added, mixed, centrifuged, and then the virus was concentrated.
The β-galactosidase gene (LacZ; Stratagene) was inserted into the NotI site of the AAV2 vector. Recombinant AAV2 with the LacZ gene (AAV2-LacZ) and the AAV2 vector alone were also prepared by the same procedures.