We used antibodies against parvalbumin (product no. P3088, mouse monoclonal, diluted 1:1000; Sigma-Aldrich, Deisenhofen, Germany) and choline acetyl transferase (ChaT; cat. no. AB144P, goat polyclonal, diluted 1:100; Chemicon, Hofheim, Germany) on wholemounts or cryostat sections. All antibody solutions were prepared in 0.3% Triton X-100 and 1% dimethylsulfoxide (DMSO). Nonspecific staining was blocked with normal goat serum or, in the case of anti-ChaT staining, with donkey serum. Primary antibodies were applied to cryostat sections overnight or to free-floating retinas for 48 to 72 hours at 4°C. After rinses in PBS, sections or isolated retinas were incubated with rabbit anti-mouse and/or donkey anti-goat secondary antibodies conjugated to Alexa488 or Alexa660 (Molecular Probes). The anti-parvalbumin stain in some cases was combined with nuclear counterstain (Sytox Green; Molecular Probes) diluted 1:50,000 and incubated for 30 minutes before coverslipping. When anti-parvalbumin and -ChaT stains were combined, primary and secondary antibodies were applied as cocktails. Wholemounts were carefully mounted with the pigmented epithelium side down and the GC side facing the coverslip. Sections and wholemounts were viewed on a confocal microscope (LSM 410; Carl Zeiss Meditec, Oberkochen, Germany) equipped with three lasers with excitation wavelengths at 488, 543, and 633 nm, and appropriate long-pass and band-pass filter sets, depending on whether multiple lasers were used simultaneously or in separate scans. Laser attenuation and photomultiplier gain control were carefully used to avoid fluorescence emission cross talk. Control experiments for antibody stains were performed by omitting the primary antibodies.
Quantification of whole flatmounted preparations was performed by scanning the entire retina in square images (320 × 320 μm) with a 40× objective (numeric aperture [NA] 1.2 W). Within each scanned image, labeled GCs and DACs were identified and recorded in a representative area of 100 × 100 μm. Thus, the DAC-to-GC ratio was determined directly, rather than from calculated cell densities. Six retinas were analyzed as wholemounted retinas; however, not all could be evaluated completely because of insufficient retrograde tracing in larger fish or problems with antibody penetration and collection of data from the periphery in small fish. We therefore performed a quantitative comparison on cryostat sections to be sure that we could account for every cell in the GCL.
For a quantitative analysis of different aged animals, we used three groups of fish (two animals each) with an average standard length of 2, 5, and 9 cm, corresponding to approximate ages of 3, 9, and 18 months. Cryostat sections in the approximate equatorial plane of retinas labeled retrogradely with rhodamine dextran were collected and stained against parvalbumin, as described earlier. Only sections containing both temporal and nasal peripheral regions and central retina were analyzed, by counting cells in the GCL and recording the total distance between the peripheral germinal zones along the sections. This total distance in each section was then divided into five equal sectors or bins to which the determined cell counts were allotted. Cells were counted along a 300-μm linear distance of the sections within the sectors. The number of parvalbumin-positive cells in the GCL and rhodamine-dextran–labeled cell bodies were always counted in the same scanned image to determine their ratio. A minimum of 10 counts per sector and size group were recorded. Before the ratio was calculated, we corrected for section thickness and different soma sizes according to Abercombie
23 and determined cell densities per unit retinal area on the level of the GCL
(Tables 1 2) . With the 40× W objective (NA 1.2) and the pinhole in the confocal light path set at 1 Airy unit, the thickness of confocal optical sections was approximately 1 μm. Soma sizes for each cell type and animal size were determined in stacks of optical images through the entire extent of cryostat sections in which the center of the cell body, (i.e., largest diameter) was identified and measured. We determined an average soma size of 4.51 ± 0.54, 4.44 ± 0.32, and 4.01 ± 0.36 μm for DACs in small, medium, and large fish, respectively. For GCs, the corresponding sizes were 5.2 ± 0.94, 4.9 ± 0.53, and 4.55 ± 0.32 μm, respectively. We performed analysis of variance (ANOVA) to test for differences in the DAC-to-GC ratios of retinal sectors within each size group and across size groups. Student’s
t-test was used for statistical comparison of two sectors of density ratios within one fish group.