Conditioned medium (45 mL) from TM5-myocilin cells was mixed with 4.5 mL of 10× preparation buffer (0.5 M NaH2PO4 [pH 8.0], 1.5 M NaCl, 0.1 M imidazole). Ni-NTA resin (4 mL; Qiagen, Valencia, CA) was added and the sample shaken at 4°C for 2 hours. After incubation, Ni-NTA resin was pelleted by centrifugation at 2500g for 5 minutes, resuspended in 40 mL of wash buffer (50 mM NaH 2PO4 [pH 8.0], 300 mM NaCl, 10 mM imidazole), and incubated with shaking at 4°C for 10 minutes. Resin was repelleted at 2500g for 5 minutes, and the supernatant was removed. The Ni-NTA resin was washed five times. Two additional washes were performed with 50 mM NaH2 PO4 (pH 8.0), 300 mM NaCl, and 50 mM imidazole. For elution of myocilin from the nickel, the resin was resuspended in 4 mL of 50 mM NaH2 PO4 (pH 8.0), 300 mM NaCl, 250 mM imidazole and shaken at 4°C for 10 minutes. Nickel resin was centrifuged at 2500g for 5 minutes, and the supernatant was isolated. The elution step was repeated. The two elutions were combined and dialyzed overnight (minimum of 16 hours) against buffer containing 50 mM NaH2 PO4 (pH 8.0), 300 mM NaCl, and decreasing amounts of imidazole (100 mM→50 mM→0 mM). Four different purification batches were used in this study.
A separate, identical purification was performed on 3-day conditioned medium from parental TM5 cells. The medium was manipulated in the same way and at the same time as that described for myocilin purification. This purification was performed to control for potential effects on outflow resistance of low levels of nonspecific, copurifying proteins.