To identify types of proliferating cells in the adult retina, double-labeling experiments were performed using the stem–progenitor marker nestin and the two pan-neuronal markers NeuN and β3-tubulin (Tuj1). Brn3b (Pou4f2) was selected as a marker for ganglion cells, blue cone opsin for cones, rhodopsin for rods, recoverin for both rod and cone photoreceptors, syntaxin and the VC1.1 epitope for amacrine and horizontal cells, glial fibrillary protein (GFAP) for Müller cells, and cellular retinaldehyde-binding protein (CRALBP) for Müller glial cells and retinal pigmented epithelium (RPE).
18 34 35 β1-Integrin was used as an endothelial cell marker. For double labeling of BrdU and nestin, β3-tubulin, NeuN, β1-integrin, Brn3b (Pou4f2), rhodopsin, blue cone opsin, GFAP, protein kinase C (PKC), syntaxin, or VC1.1, the sections were treated as just described, but after the blocking step, they were incubated with mouse anti-nestin antibody (1:10; Developmental Studies Hybridoma Bank, Iowa City, IA), anti-β3-tubulin (1:1000; Promega, Madison, WI), anti-β1-integrin (1:100; Transduction Laboratories, Lexington, KY), anti-NeuN (1:50; Chemicon, Torrance, CA), anti-PKC (1:100; Sigma-Aldrich); anti-syntaxin (1:100; Sigma-Aldrich) or anti-VC1.1 (HNK-1) antibody (1:100; Sigma-Aldrich); goat anti-Brn3b (1:100; Santa Cruz) or anti-rhodopsin antibody (1:50; Santa Cruz); or chicken anti-blue cone opsin antibody
36 (1:5000) or rabbit anti-GFAP antibody (1:100; Dako, High Wycombe, UK) at 4°C overnight. Incubation with primary antibody was followed by a 1-hour incubation with the appropriate species-specific secondary antibody: Cy3-conjugated anti-mouse antibody (1:100; Jackson ImmunoResearch), Cy3-conjugated anti-goat antibody (1:100; Jackson ImmunoResearch), Alexa-594-conjugated anti-chicken antibody (1:100; Molecular Probes, Eugene, OR), or rhodamine-conjugated anti-rabbit antibody (1:100; Jackson ImmunoResearch). Rabbit anti-recoverin antibody (1:100; Chemicon) and rabbit anti-CRALBP antibody (1:1000; kindly provided by Jack Saari, Department of Biochemistry, University of Washington, Seattle, WA) were used, together with a TRITC-conjugated anti-rabbit antibody (1:100, Jackson ImmunoResearch). After the slides were washed in PBS, they were then incubated with anti-BrdU antibody (1:100) for 2 hours, followed by incubation in secondary antibody for 40 minutes.