Lymphoma cells were selected and captured from the eyes manually or by laser capture microdissection (PixCell IIe microscope; Arcturus, Mountain View, CA). RNA was extracted from the microdissected lymphoma cells (PicoPure RNA isolation kit; Arcturus) and used for cDNA synthesis. A reverse transcriptase system (Supercript II RNase H; Invitrogen, Carlsbad, CA) and random primers (Promega, Madison, WI) were used. PCR amplification was performed with the following primer sequences: IL-2, sense, 5′-TTC AAG CTC CAC TTC AAG CTC TAC AGC GGA AG-3′, antisense, 5′-GAC AGA AGG CTA TCC ATC TCC TCA GAA AGT CC-3′; IL-4, sense, 5′-CCA GCT AGT TGT CAT CCT GCT CTT CTT TCT CG-3′, antisense, 5′-CAG TGA TGT GGA CTT GGA CTC ATT CAT GGT GC-3′; IL-6, sense, 5′-TTC CTC TCT GCA AGA GAC T-3′, antisense, 5′-TGT ATC TCT CTG AAG GAC T-3′; IL-10, sense, 5′-ATG CAG GAC TTT AAG GGT TAC TTG GGT T-3′, antisense, 5′-ATT TCG GAG AGA GGT ACA AAC GAG GTT T-3′; IFN-gamma, sense, 5′-CTT CCT CAT GGC TGT TTC-3′, antisense, 5′-CCA GTT CCT CCA GAT ATC-3′; CCR1 (CC chemokine receptor-1), sense, 5′-TAC AAG TTG AAA GAC GAC TGG-3′, antisense, 5′-ATG AGG GCT ACA GGT ACG G-3′; and 18S, sense, 5′-AGG AAT TGA CGG AAG GGC AC-3′, antisense, 5′-GGA CAT CTA AGG GCA TCA CA-3′.
Primers were labeled with 32P before PCR. Reactions were conducted (PTC-200 DNA Engine; MJ Research, Waltham, MA) for 40 cycles with an annealing temperature of 56°C for IL-2 and IL-6, 57°C for IL-4 and IL-10, 58°C for CCR1, and 59°C for IFN-gamma and 18S; a denaturing temperature of 94°C; and an extension temperature of 72°C. PCR products were separated on polyacrylamide gel, and radioactive bands were detected (PhosphorImager Storm 860 with Image-Quant software; Molecular Dynamics, Sunnyvale, CA).