Dose–response assays were performed on both differentiated and undifferentiated RPE cells to determine the concentrations of
t-BOOH and H
2O
2 that would reliably kill 80% to 95% of the cells. ARPE-19 cells and human primary 159 RPE cells were seeded onto 96-well plates at various densities (3,200, 5,000, 10,000, 20,000, 40,000, 60,000 or 80,000 cells/well) and grown for 24 hours. On the evening before the start of the cytoprotection assays, the differentiated ARPE-19 cells were switched to a low-calcium medium containing DMEM high glucose (calcium-free; Invitrogen) supplemented with 10% dialyzed FBS (Hyclone), 2 mM
l-glutamine, 1 mM sodium pyruvate, and 50 μM CaCl
2. On the following day, differentiated and undifferentiated cells were replenished with fresh culture medium containing 10% dialyzed FBS and preincubated with flavonoids or other natural products for 1 hour before the addition of the chemical oxidants.
t-BOOH or H
2O
2 were added at concentrations that had been found to kill more than 80% to 90% of the cultured cells in dose–response assays. After an overnight incubation, cell viability was determined by a modified version of the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) assay.
23 The assay was performed by removing the cell culture medium and replacing it with 100 μL fresh culture medium containing 5.0 mg/mL MTT. After 4 hours of incubation at 37°C, cells were solubilized overnight with 100 μL of a solution containing 50% dimethylformamide and 20% SDS (pH 4.7). The absorbance at 560 nm was measured with a microplate reader (Spectromax 190; Molecular Devices Corp., Sunnyvale, CA). To assure that the spectrophotometric readings correlated with cell viability, all cells were examined by microscopy before the addition of the MTT. Each experiment was performed at least three times, and multiple control subjects were included. For each concentration of a specific compound, six wells were analyzed. Of these six wells, the cells in two were treated with the flavonoid alone to determine the toxicity of the compound. The cells in the remaining four wells were treated with the compound of interest and either
t-BOOH or H
2O
2. Background absorbance values consisted of blank wells (with no cells) into which medium, MTT dye, and solubilization buffer were added. The background readings were subtracted from the average absorbance readings of the treated wells to obtain an adjusted absorbance reading that represented cell viability. This reading was divided by the adjusted absorbance reading of untreated cells in control wells to obtain the percentage of cell survival. To determine the efficacy, potency and EC
50s of the compounds of interest, the dose–response data were analyzed (Prism 4 software; GraphPad, San Diego, CA).