For Western blot analysis of the activation of ERK1/2 and RhoA/ROCK pathways, SIRC confluent monolayers were wounded as described earlier. In the presence or absence of Ap4A or Ap3A 100 μM, the antagonists suramin (for Ap4A) and RB-2 (for Ap3A) and the inhibitors U0126 and Y27632 were assayed at 100 μM and 100 nM, respectively, by using the same protocol as previously described for the migration assays.
After collection, the cells were lysed in 20 mM Tris (pH 7.5), 150 mM NaCl, Triton X-100 (containing 1 mM PMSF, 1 mM NaF, 1 mM Na3VO4, 1 μg/μL pepstatin A, 2 μg/μL leupeptin, and 1 μg/μL aprotinin). After centrifugation at 15,000 rpm 20 minutes 4°C to remove debris, the supernatants were collected. To separate cytoplasm from the nuclear fraction, we suspended the cells in two volumes of buffer A (MgCl2 1.5 mM, KCl 10 mM, and Tris [pH 7.9] 10 mM) containing 1 mM PMSF, 1 mM NaF, 1 mM Na3VO4, 1 μg/μL pepstatin A, 2 μg/μL leupeptin, 1 μg/μL aprotinin, and 0.05% NP-40. After the mixture was centrifuged at 2,500g, the supernatants containing the cytosolic soluble fraction were collected. The pellet was resuspended in 1 volume of buffer B (glycerol 20%, MgCl2 1.5 mM, KCl 10 mM, and Tris [pH 7.9] 20 mM) and 2:3 volume of buffer C (glycerol 20%, MgCl2 1.5 mM, KCl 1.2 M, and Tris [pH 7.9] 20 mM) containing 1 mM PMSF, 1 mM NaF, 1 mM Na3VO4, 1 μg/μL pepstatin A, 2 μg/μL leupeptin, and 1 μg/μL aprotinin. After 45 minutes’ incubation on ice, the pellet was centrifuged at 20,000g, and the supernatants were collected. Protein concentration was determined by Bradford protein assay. Protein (45 μg) was subjected to SDS-PAGE (10% for ERK1/2, 7% for ROCK-I, and 12% for pMLC2) and transferred to a nitrocellulose membrane. To block nonspecific binding, we treated the membranes with PBS with 5% skimmed milk and then incubated them overnight with primary antibodies against pERK1/2, ROCK-I, and pMLC2 diluted 1:1000 in PBS/Tween-20 0.05% containing 2% skimmed milk. The membranes were then washed three times (10 minutes per wash) with PBS/Tween-20 0.05%, and further incubated with the goat anti-mouse IgG-HRP secondary antibody diluted 1:2000. Proteins were visualized by enhanced chemiluminescence detection according to the manufacturer’s protocol (GE Healthcare).
Blots were stripped (1 M Tris [pH 6.8], SDS 10%, and β-mercaptoethanol), blocked and reprobed with ERK2 or MLC2 antibody diluted 1:1000, to check that all lanes were loaded with the same amount of protein.
Intensities of the respective band were examined by densitometric analysis (Kodak Gel Logic 2000 and Molecular Imaging Software; Eastman Kodak, Grupo Taper, Alcobendas, Madrid, Spain).