After 3 days of culture, the retina-RPE-choroid and neural retina specimen were fixed for 24 hours in 4% paraformaldehyde in PBS (vol/vol) at room temperature. After dehydration in an ascending series of ethanol (70%, 96%, 100%; vol/vol) the tissue was transferred to xylol and embedded in paraffin according to standard protocols. Three-micrometer–thick serial sections were mounted on poly-l-lysine–coated slides and dried at 37°C for 24 hours. Before processing for immunohistochemistry, sections were deparaffinized in xylene and hydrated in a graded series of ethanol (100%, 96%, 70%; vol/vol and water), and sections from all cultured tissues were stained with hematoxylin-eosin (H&E) and analyzed by light microscopy (Zeiss Axioskop, Oberkochen, Germany) for morphologic damage; only histomorphologically intact tissues were processed for immunohistochemistry. For immunohistochemistry, deparaffinized sections were transferred into citrate buffer (0.1 M, pH 6) and irradiated by microwave for 15 minutes at 500 W to increase permeabilization and unmask antigens. After stepwise exchange of citrate buffer by PBS and cooling, sections were washed with PBS and blocked with 20% normal goat serum (NGS) and 2% BSA in PBS (vol/vol) for 1 hour. Sections were incubated at room temperature with the appropriate primary antibody diluted in 10% NGS and 2% BSA in PBS. After 3 hours of incubation with the primary antibodies, the sections were washed three times, 5 minutes each time, with PBS, and the presence of the primary antibody was detected by incubating the sections in the dark for 3 hours with the secondary antibody goat anti-mouse IgG (H+L) or goat anti-rabbit IgG (H+L) (Alexa Fluor 488; Mobitec, Göttingen, Germany) at a 1:500 dilution in 10% NGS and 2% BSA in PBS. To control for nonspecific binding by the secondary antibody, the primary antibody was omitted. After three more washes, 5 minutes each time, with PBS, the sections were incubated for 5 minutes with DAPI (350 μg DAPI/mL in 50% ethanol, 50% PBS; Merck, Darmstadt, Germany) for nuclear staining. After the DAPI solution was removed, the slides were covered with a few drops of glycine/PBS (9:1; vol/vol) and were analyzed by fluorescence microscopy.
Sections were analyzed for expression of the following proteins: glial fibrillary acidic protein (GFAP) as an indicator of astrocyte and glial cells, glutamine synthetase (GS) as an indicator of Müller cells, vimentin as an indicator of cytoskeleton and cell shape, rhodopsin as an indicator of photoreceptors, and smooth muscle actin (SMA) as an indicator of smooth muscle and pericytes of blood vessels. The following primary antibodies were used: anti-GFAP, mouse monoclonal antibody, clone G-A-5, (1:100; catalog number G-3893; Sigma, Munich, Germany); anti-GS, rabbit polyclonal antibody (1:300; catalog number G 2781; Sigma); anti-vimentin, mouse monoclonal antibody, clone V9, (1:100; catalog number V-6630; Sigma); anti-rhodopsin, mouse monoclonal antibody, clone 1D4 (1:500; catalog number R-5403; Sigma); anti-SMA, mouse monoclonal antibody, clone 1A4 (1:100; catalog number M0851; Dako, Hamburg, Germany), and anti-VEGF, chicken polyclonal (1:50; catalog number ab14078; Abcam, Cambridge, UK). Sections were analyzed for localization of antigens using fluorescence microscopy and were photographed under a microscope (Polyvar; Leica, Bensheim, Germany).
Bevacizumab was localized by immunocytochemistry using Cy3-conjugated donkey anti-human IgG (H+L, 1:100; Jackson ImmunoResearch, Suffolk, UK) according to the procedure described. Sections were observed and photographed using a confocal laser scanning microscope (LSM 510; Carl Zeiss, Oberkochen, Germany).