Abstract
purpose. To determine the association of human leukocyte antigen (HLA) C and its cognate killer cell immunoglobulin-like receptor (KIR) ligands with age-related macular degeneration (AMD).
methods. HLA class I allele groups including the HLA-C principal alleles were genotyped in a cohort of 104 AMD cases and 93 controls by using the PCR-SSP (sequence-specific primers) method. This cohort was then genotyped for 16 KIR genes by PCR-SSP. Frequencies of the tested HLA/KIR alleles were then compared between patients with AMD and normal control subjects. HLA-C1, -Cw*07, and -Cw*0701 genotypes and their combinations with KIR genotypes/haplotypes were tested for association with AMD. Probabilities were obtained with a two-tailed χ2 test and Bonferroni correction applied for multiple testing (P c ).
results. The HLA-Cw*0701 allele, in combination with the inhibitory KIR AA haplotype was associated with AMD after logistic regression analysis (P = 0.006, P c = 0.036, OR = 4.35, 95% CI = 1.41–13.44).
conclusions. The HLA-Cw*0701 allele and KIR haplotype AA are associated with AMD. This genotype combination suggests that natural killer cells have a role in the pathogenesis of AMD. Replication studies are needed to confirm these novel HLA-KIR associations with AMD.
Age related macular degeneration (AMD) is the commonest cause of irreversible visual loss in the Western world, affecting approximately 25 million people worldwide.
1 2 There are now multiple lines of evidence suggesting an important role for inflammatory events in the pathogenesis of AMD. Histologically, extracellular drusen deposits in the retina of patients with AMD have been shown to contain proteins that modulate the body’s response to inflammation. These proteins include vitronectin, complement, and immunoglobulins.
3 Inflammatory cells including macrophages,
4 5 6 multinucleate giant cells,
5 7 8 fibroblasts, and mast cells have been observed in association with Bruch’s membrane in AMD donor eyes.
9 Some characteristics of AMD have also been described in mice with macrophage defects.
10 In addition, natural killer (NK) cells, which are lymphocytes of the innate immune system, have been described in subretinal neovascular lesions seen in patients with AMD.
11 NK cells may therefore also be associated with the pathogenesis of AMD.
The human leukocyte antigen (HLA) system is essential for the immune regulation of self and foreign peptides via presentation of processed antigenic peptides to both CD4 helper and CD8 cytotoxic T lymphocytes. We previously reported the association of HLA with age-related macular degeneration (AMD).
12 Individuals harboring the HLA-Cw*0701 allele were found to have an increased risk of AMD.
12 Evidence from this study points to an important mechanism that may contribute to susceptibility for immune-mediated attacks on the RPE or endothelial cells in AMD. However, the precise nature of how this HLA association contributes to AMD is unknown.
A possible mechanism by which HLA class I molecules may be associated with AMD is via killer cell immunoglobulin-like receptors (KIRs). KIRs are regulatory molecules that are expressed predominantly by NK cells and also T cells.
13 NK cells interact with HLA class I (A, B, C) ligands through their KIR receptors. Particularly relevant to NK recognition by KIRs are polymorphic HLA-C molecules. Through interaction with inhibitory KIRs, HLA-C molecules are able to modulate NK cell function.
Healthy cells are protected from spontaneous killing when they express an appropriate HLA class I ligand for an inhibitory KIR receptor expressed on NK cells. This observation corresponds with the reported phenotypic dominance of KIR-mediated inhibition over activation.
14 However, aberrant or reduced levels of HLA class I expression can result in spontaneous destruction by NK cells. In this context, the expression patterns of HLA class I and II antigens in the choroid and sub-RPE deposits may be important.
12 Notably, the presence of class II antigens in drusen and RPE cells
15 and the apparent lack of class I antigens.
It follows that certain combinations of HLA-C and KIR gene variants may influence susceptibility to AMD. To test this hypothesis we analyzed HLA-C and KIR genotypes, both individually and in combination for association with AMD.
The importance of defining associations between HLA and KIR genes in AMD lies in providing new insights into its basic pathogenesis and in helping to define an at-risk population for preventive measures to become applicable. Because of the critical role of HLA in regulating the immune response, most the HLA gene polymorphisms are known to result in functional amino acid substitutions in the expressed HLA molecules. These variant HLA molecules in turn affect the immune response to a vast range of antigens, with interindividual differences in immune responses to complex or simple antigens.
25 Many HLA gene polymorphisms have been linked to susceptibility in a large number of immunologically mediated diseases affecting the retina and uvea of the eye, the skin, the gut, and the endocrine and joint systems.
26 KIR gene models have now been proposed that genetically control levels of activation or inhibition.
14 Many KIR genes and combinations of HLA class I -KIR genotypes that predispose to activating receptor-ligand interactions have now been linked to autoimmune inflammatory diseases including rheumatoid arthritis,
27 psoriatic arthritis,
28 and psoriasis vulgaris.
29
Significant associations have been reported between HLA-DRB1*15 (
P c = 0.000001) and DQB1*06 (
P c = 0.00001) alleles and the development of CNV in presumed ocular histoplasmosis syndrome.
30 These findings, along with the data from the present study, support the notion that certain HLA alleles are associated with CNV in various retinal diseases. Hence, further investigation of these three HLA alleles in a larger and/or different cohort would be useful in determining the amount of risk contributed by them toward advanced AMD and CNV formation.
The combined HLA-Cw*0701 allele and KIR AA haplotype association with AMD status was highly significant in our Southampton cohort when tested by stepwise logistic regression analysis. The risk for disease was greater than fourfold when compared with controls for this paired HLA allele and KIR haplotype. The preponderance of inhibiting KIR 2DL5 in controls seems to be protective for AMD, whereas the presence of an appropriate HLA-C1 ligand interaction seems to render an individual more susceptible to AMD, perhaps because KIR2DL5 is a component of the B group of haplotypes. Therefore, its association with protection from AMD could be an inverse correlate of the susceptibility effect of the A group of haplotypes. Alternatively, KIR2DL5 itself or the B group of haplotypes which contain most of the activating KIR may be protective against this disorder.
Traditionally, activating KIR genotypes have been reported to be important in inflammatory conditions. A weak association of the activating receptor–ligand pair KIR2DS2:HLA-C 1 was observed in diabetes mellitus.
31 A correlation with an activating KIR genotype was also found in the chronic inflammatory disease idiopathic bronchiectasis.
32 This activating receptor association appears to be involved more in costimulation or activation of T cells rather than of NK cells.
33
The underlying mechanisms by which KIR and HLA genes determine susceptibility to various ocular diseases has not been fully elucidated yet, and it should be stressed that a KIR-HLA association determined by a case–control study does not necessarily confirm KIR-HLA causality, but may reflect linkage disequilibrium (LD) with causal polymorphisms in other genes. The epistatic interactions of KIR with HLA make this less likely though. Although we cannot exclude LD with non KIR-HLA polymorphisms as causal in AMD, our data bear similarities to that observed in pre-eclampsia.
24 In this disease the KIR-HLA genotype of the mother and fetus has been hypothesized to influence vascular remodeling in the placenta, leading to pre-eclampsia. This model, although highly speculative, could be relevant in AMD or, in particular, during CNV formation.
Linkage across the KIR locus is difficult to assess, as it is hard to separate haplotypes into true linkage groups, as we have genotyped both chromosomes simultaneously and because the KIR locus is so diverse (i.e., there are many different gene combinations especially in the telomeric part of the locus). This problem makes discerning a haplotype without typing the parents impossible. We tested for two copies of the common haplotype (AA), but were unable to distinguish the AB from the BB group of haplotypes.
It is important to note that the AA haplotype is a minimal KIR haplotype containing the inhibitory receptors for groups 1 and 2 HLA-C allotypes (KIR2DL1 and KIR2DL3) and the activating KIR2DL4 and KIR2DS4, the latter gene being nonfunctional in many individuals.
34 As the KIR2DL3–HLA-C interaction is considered one of weak inhibition, this haplotype is weakly inhibitory. This interaction may confer susceptibility to AMD via either NK cells or via weak inhibition of KIR-positive T cells, which are predominantly of the antigen-experienced effector–memory type.
35
Because of the extreme polymorphic nature of the KIR and HLA gene regions, sampling variation between cases and controls can easily lead to both false-positive and -negative associations. Accordingly, a Bonferroni correction was applied in this study. Applying the correction for functionally well characterized KIR alleles permitted a realistic Bonferroni correction, rather than an overly conservative correction for all possible KIR alleles, which may cause even true-positive associations to be discarded.
This study had 80% power to detect significant differences in HLA and KIR genotype frequencies between cases and controls at α = 0.05. For example, for an allele occurring at a frequency of 10% in the control population, detectable ORs are 2.3 for a predisposing allele and 0.5 for a protective allele with 95% confidence levels. The corresponding detectable ORs for KIR genes were 2.9 for a predisposing genotype and 0.2 for a protective genotype with 95% confidence levels. We may therefore not have detected smaller HLA and KIR associations with our sample sizes. It is also well recognized that the first report to describe an association between a gene and a disease often overestimates the fraction of disease caused by mutation in the gene in question.
36 This emphasizes the need for replication studies to assess the HLA-KIR effect in further AMD populations.
In summary, this study is the first to establish HLA-C/KIR gene–mediated genetic susceptibility in AMD. The HLA-C*0701 allele in combination with inhibiting KIR haplotypes (AA genotype) is strongly associated with AMD. Continuing on from this hypothesis-generating study, further larger studies in different ethnic populations are needed to confirm these HLA-KIR associations with AMD. In addition, where possible, these studies should be complemented by functional studies to determine the contribution of these genes to the development of AMD. Dissecting the role of HLA and immune pathways in AMD may ultimately lead to opportunities to modulate these pathways by precise pharmacologic means and thus improve visual outcome in this devastating disease.
Supported by the American Health Assistance Foundation, the Wellcome Trust, Lord Sandberg, and the Brian Mercer Trust.
Submitted for publication February 5, 2008; revised March 28 and May 17, 2008; accepted September 9, 2008.
Disclosure:
S.V. Goverdhan, None;
S.I. Khakoo, None;
H. Gaston, None;
X. Chen, None;
A.J. Lotery, None
The publication costs of this article were defrayed in part by page charge payment. This article must therefore be marked “
advertisement” in accordance with 18 U.S.C. §1734 solely to indicate this fact.
Corresponding author: Andrew Lotery, Division of Clinical Neurosciences, Level D, South Lab and Path Block, Mailpoint 806, Southampton General Hospital, Southampton, SO16 6YD, UK;
[email protected].
Table 1. Basic Available Demographic Characteristics of the Southampton Study Population
Table 1. Basic Available Demographic Characteristics of the Southampton Study Population
| AMD Cases n = 104 (%) | Controls n = 93 (%) |
Age | | |
Mean | 76.5 | 73.1 |
Range | 55–91 | 55–91 |
SD | 7.8 | 10.2 |
Sex | | |
Female | 67 (64.4) | 58 (62.4) |
Male | 37 (35.6) | 35 (37.6) |
BMI | n = 86 | n = 84 |
Mean | 26.4 | 26.1 |
Range | 17.3–40.5 | 17.7–36.9 |
SD | 4.6 | 4.5 |
Smoking status | n = 86 | n = 86 |
Ever smoked | 49 (57.0) | 34 (39.5) |
Never smoked | 37 (43.0) | 52 (60.5) |
Table 2. HLA-C Allele Groups (C1, C2), Cw*07 and Cw*0701 Allele Frequencies in Southampton AMD and Control Groups
Table 2. HLA-C Allele Groups (C1, C2), Cw*07 and Cw*0701 Allele Frequencies in Southampton AMD and Control Groups
HLA-C Alleles | AMD Group n = 104 (%) | Control Group n = 93 (%) | P * | OR, † | 95% CI |
C1C1 | 43 (41.3) | 46 (49.4) | 0.25 | 0.72 | 0.41–1.27 |
C1C2 | 50 (48.1) | 34 (36.6) | 0.10 | 1.60 | 0.91–2.84 |
C2C2 | 11 (10.6) | 13 (14.0) | 0.46 | 0.73 | 0.31–1.71 |
C1 alleles | 136 (65.4) | 126 (67.7) | 0.38 | 1.16 | 0.82–1.64 |
C2 alleles | 72 (34.6) | 60 (32.3) | 0.14 | 1.44 | 0.88–2.39 |
Cw*07 allele | 63 (60.1) | 46 (49.5) | 0.11 | 1.57 | 0.89–2.76 |
Cw*0701 allele | 43 (41.3) | 25 (26.9) | 0.03, ‡ | 1.92 | 1.05–3.50 |
Table 3. KIR Genotype and Haplotype Frequencies in Southampton AMD and Control Groups
Table 3. KIR Genotype and Haplotype Frequencies in Southampton AMD and Control Groups
KIR Genotypes | AMD Group n = 104 (%) | Control Group n = 93 (%) | P * | OR, † | 95% CI |
2DL1 | 101 (97.1) | 91 (97.8) | 0.74 | 0.74 | 0.12–4.52 |
2DL2 | 50 (48.1) | 48 (51.6) | 0.24 | 0.87 | 0.50–1.52 |
2DL3 | 98 (94.2) | 90 (96.8) | 0.39 | 0.54 | 0.13–2.24 |
2DL4 | 103 (99.0) | 93 (100.0) | 0.34 | 1.90 | 1.67–2.17 |
2DL5 | 38 (36.5) | 52 (55.9) | 0.006, ‡ | 0.45 | 0.26–0.80 |
2DS1 | 36 (34.6) | 43 (46.2) | 0.09 | 0.61 | 0.35–1.09 |
2DS2 | 50 (48.1) | 50 (53.8) | 0.42 | 0.79 | 0.45–1.39 |
2DS3 | 25 (24.0) | 32 (34.4) | 0.10 | 0.60 | 0.32–1.12 |
2DS4 | 95 (91.3) | 89 (95.7) | 0.21 | 0.47 | 0.14–1.59 |
2DS5 | 27 (26.0) | 28 (30.1) | 0.51 | 0.81 | 0.44–1.52 |
3DL1 | 101 (97.1) | 90 (96.8) | 0.89 | 1.12 | 0.22–5.70 |
3DL2 | 104 (100.0) | 93 (100.0) | — | — | — |
3DL3 | 104 (100.0) | 92 (98.9) | 0.29 | 3.38 | 0.13–84.3 |
3DS1 | 30 (28.8) | 34 (36.6) | 0.24 | 0.70 | 0.38–1.28 |
2DP1 | 101 (97.1) | 91 (97.8) | 0.74 | 0.74 | 0.12–4.53 |
3DP1 | 104 (100.0) | 93 (100.0) | — | — | — |
AA | 35 (33.7) | 23 (24.7) | 0.17 | 1.54 | 0.82–2.87 |
AB/BB | 69 (66.3) | 70 (75.3) | 0.17 | 0.65 | 0.34–1.20 |
Table 4. HLA-C and KIR Receptor Paired Genotype Frequencies in Southampton AMD and Control Groups
Table 4. HLA-C and KIR Receptor Paired Genotype Frequencies in Southampton AMD and Control Groups
HLA + KIR Genotypes | AMD Group n = 104 (%) | Control Group n = 93 (%) | P * | OR, † | 95% CI |
C1 group + 2DL2 | 37 (35.6) | 43 (46.2) | 0.12 | 0.64 | 0.36–1.14 |
C1 group + 2DL3 | 87 (83.7) | 77 (82.8) | 0.87 | 1.06 | 0.50–2.25 |
C1 group + 2DS2 | 37 (35.6) | 45 (48.4) | 0.07 | 0.59 | 0.33–1.04 |
Cw*07 + 2DL2 | 27 (26.0) | 27 (29.0) | 0.62 | 0.86 | 0.46–1.60 |
Cw*07 + 2DL3 | 62 (59.6) | 43 (46.2) | 0.06 | 1.71 | 0.97–3.02 |
Cw*07 + 2DS2 | 28 (26.9) | 29 (31.2) | 0.51 | 0.81 | 0.44–1.50 |
Cw*0701 + 2DL2 | 19 (18.3) | 14 (15.1) | 0.54 | 1.26 | 0.59–2.68 |
Cw*0701 + 2DL3 | 18 (17.3) | 24 (25.8) | 0.14 | 0.60 | 0.30–1.20 |
Cw*0701 + 2DS2 | 20 (19.2) | 15 (16.1) | 0.57 | 1.23 | 0.59–2.59 |
Table 5. HLA-C and KIR Genotype Paired Frequencies in Southampton AMD and Control Groups
Table 5. HLA-C and KIR Genotype Paired Frequencies in Southampton AMD and Control Groups
HLA + KIR Genotypes | AMD Group n = 104 (%) | Control Group n = 93 (%) | P * | P c , † | OR, ‡ | 95% CI |
C1 group + AA | 31 (29.8) | 23 (24.7) | 0.42 | 2.52 | 1.29 | 0.68–2.43 |
Cw*07 + AA | 25 (24.0) | 8 (8.6) | 0.003, § | 0.018, § | 3.36 | 1.43–7.89 |
Cw*0701 + AA | 17 (16.3) | 4 (4.3) | 0.006, § | 0.036, § | 4.35 | 1.41–13.44 |
C1 group + AB/BB | 67 (64.4) | 70 (75.3) | 0.09 | 0.54 | 0.59 | 0.32–1.10 |
Cw*07 + AB/BB | 38 (36.5) | 38 (40.9) | 0.54 | 3.24 | 0.83 | 0.47–1.48 |
Cw*0701 + AB/BB | 26 (25.0) | 21 (22.6) | 0.69 | 4.14 | 1.14 | 0.59–2.21 |
Table 6. Multivariate Logistic Regression Analysis Showing the Effect of HLA-Cw*0701 and KIR 2DL5/AA Genotypes in AMD
Table 6. Multivariate Logistic Regression Analysis Showing the Effect of HLA-Cw*0701 and KIR 2DL5/AA Genotypes in AMD
HLA/KIR Genotypes | P | OR | 95% CI |
HLA-Cw*0701 with KIR AA | 0.013* | 4.35 | 1.41–13.44 |
HLA-Cw*0701 without KIR AA | 0.308 | 1.32 | 0.95–2.50 |
KIR 2DL5 | 0.051 | 0.42 | 0.21–0.86 |
KIR AA | 0.177 | 0.55 | 0.23–1.31 |
The authors thank the Southampton Wellcome Trust Clinical Research Facility and our patients for their support.
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