Rats were terminally anesthetized and perfused through the left ventricle with at least 60 mL PBS, to remove blood from corneal vessels. Transplanted eyes were excised and washed in Hanks’ balanced salt solution (HBSS; Invitrogen-Gibco, Paisley, UK) containing 1 mM HEPES buffer and 0.1% NaN3, corneas were removed, and cells adhering to endothelium gently scraped off into HBSS. The AC was washed out with further HBSS. After one further wash, the Fc receptors were blocked with a mixture of heat-inactivated 10% mouse and 10% rat serum for 30 minutes at 4°C, followed by one or more PE-, FITC-, or PerCP-conjugated antibodies specific for CD4, CD25, CD68 (ED1), CD163 (ED2), CD11b, CD161 (Serotec, Oxford, UK), αβTCR, CD8, MHC class II (BD Biosciences, Oxford, UK) or isotype-matched negative controls. Before CD68 staining, the cells were permeabilized according to the manufacturer’s instructions. The cell counts were acquired on a flow cytometer (FACSCalibur; BD Biosciences, San Jose, CA). The leukocyte subpopulation was defined according to size (forward scatter) and granularity (side scatter), the gate being set initially on live (propidium iodide negative) CD45+ cells. For cytokine expression, the cells were incubated after harvesting for 2 to 2.5 hours at 37°C in complete RPMI (Invitrogen-Gibco) containing 3% rat serum and 1 μL/mL brefeldin A (GolgiPlug; BD Biosciences). Detection of IFN-γ expression was achieved by prestimulating the cells for 4 hours at 37°C with phorbol myristate acetate (PMA,10 ng/mL) and ionomycin (400ng/mL; Sigma-Aldrich, Poole, UK), with 1 μL/mL brefeldin A being added for the final 2 hours. The cells were then incubated with cell surface antibodies, fixed, and permeabilized according to the manufacturer’s instructions and incubated for 30 minutes at 4°C with PE-labeled hamster anti-rat/mouse TNF-α, mouse anti-rat IL-10, mouse anti-rat IFN-γ, or the appropriate control antibodies (BD Biosciences), followed by flow cytometric acquisition. Positive control (RiCK-2) cells for cytokine labeling, unlabeled antibody, and cytokines for blocking were obtained from BD Biosciences. Flow cytometric analysis was performed with commercial software (FlowJo; Tree Star Inc., Ashland, OR). Gates were set with reference to fluorescence intensity of cells labeled with isotype-matched negative control antibodies.