To detect the low levels of HIF-1α typically found in tissues in vivo, samples of lens epithelium were dissected rapidly in medium kept on ice and lysed directly in 2× electrophoresis sample buffer, to minimize exposure to room air. After electrophoresis in 4% to 12% gradient gels, the proteins were transferred to nitrocellulose membranes for ≥4 hours and probed with a rabbit polyclonal antibody to HIF-1α (Bethyl Laboratories, Inc., Montgomery, TX) diluted 1:500 or 1:1000. Detection was with horseradish peroxidase (HRP)-labeled anti-rabbit secondary antibody diluted 1:5000 (Santa Cruz Biotechnology, Santa Cruz, CA) and chemiluminescence (SuperSignal West Dura; Pierce Chemical) with exposures of 1 to 30 minutes.
To determine the relative levels of p27KIP1, flatmounts of the lens epithelium were prepared and the central, mitotically quiescent zone was separated from the peripheral, germinative zone with a trephine (1.5 mm for epithelia from 1-month-old animals and 2.0 mm for epithelia from 9-month-old animals). Epithelial cells were lysed in RIPA buffer. Loading of the gels was equalized by determining the DNA content of a 10- to 15-μL aliquot of each sample (PicoGreen dsDNA Quantitation Kit; Invitrogen-Molecular Probes, Eugene, OR). Protein samples representing equal amounts of DNA were loaded, and Western blot analysis was conducted. Blots were probed with a rabbit polyclonal antibody to p27KIP1 (C-19, sc-528; Santa Cruz Biotechnology). The intensity of the stained bands was normalized to the level of β-actin on the same blots by using a mouse monoclonal antibody (MAB 1501R, 1:2000; Chemicon, Temecula, CA) and HRP-labeled anti-mouse secondary antibody (1:10,000; Santa Cruz). Blots were exposed to chemiluminescence (Hyperfilm ECL; GE Healthcare, Buckinghamshire, UK) and band intensities were recorded and quantified with a gel documentation system (EDAS 290; Eastman Kodak, Rochester, NY). Normalization was performed by adjusting the intensity of the p27KIP1 band, based on the level of β-actin, then setting the highest normalized intensity for p27KIP1 to 1.0 for each age group. The results of three experiments, with duplicate blots for each experiment, were normalized, averaged, and plotted ± SEM.