All seven bands in samples from the orbital layer were also submitted for identification by MS, with the number of peptide matches and MOWSE scores ranging from 62 to 264 and 1043 to 5469, respectively
(Table 1) . The slowest-migrating band was identified as embryonic MyHC. This band has also never been observed in any dog limb muscle from more than 30 adult dogs in any study in this laboratory. The second and third slowest isoforms were identified as MyHC-IIA and -IID. These bands comigrated with the two identically identified MyHC isoforms in the global layer and with dog thyroarytenoid and limb muscles.
31 An additional match of the third slowest band with the second highest MOWSE score for this band predicted that this band was MyHC-extraocular (MyHC-EO). Therefore, although the highest probability is associated with this protein being MyHC-IID, it is possible that this gel band also contains MyHC-EO. Therefore, this band from the orbital layer is labeled MyHC-IID/EO. The fourth slowest band was identified by immunoblotting
(Fig. 2) , because the MS results were ambiguous, possibly due to the relatively low amount of this protein. This band was recognized, with greater specificity than the other MyHC bands, by anti-MyHC-Ton ALD-58 antibody. It is noteworthy that this band, although present at a very low level, compared with other MyHC bands, stained the most intensely with ALD-58. This band was, therefore, identified as MyHC-Ton. The MS results and the patterns of comigration with other MyHC isoforms in single fibers (described below) suggest that two MyHC isoforms comigrate as the fifth slowest migrating band. This band comigrated with the band in the global layer that was identified by MS as MyHC-IIB. The band (orbital layer) from one dog was identified by MS as MyHC-IIB and from another dog as MyHC-α. The MS results from the second dog yielded five matches for this band with nearly equal probabilities that this band was either MyHC-β or -α. However, the migration of this band was distinctly slower than that of MyHC-β in cardiac ventricles. Human MyHC-β and -α share 96.2% homology at the deduced amino acid level.
39 The high homology likely is responsible for the nearly equal MS probabilities of this band being MyHC-β or -α in the second dog. We, therefore, conclude that the fifth slowest migrating band in the orbital layer is either MyHC-IIB or MyHC-α. The isoform in this band was always coexpressed with other isoforms in individual fibers (described later). We assume that, when the isoform in this band was expressed in fibers with only fast-type isoforms (MyHC-IIA and -IID/EO), it was MyHC-IIB. We also assume that when this isoform was expressed in other fibers that expressed slow-type isoforms, it was MyHC-α. In support of these assumptions are the independent observations of MLC isoforms in the same fibers. Briefly, only fast-type MLC isoforms were observed in the former, and no fast-type MLC isoforms were observed in the latter. The sixth band was identified by MS as MyHC-I and from its comigration with MyHC-I in adult dog limb muscles
31 and with the predominant MyHC isoform (i.e., MyHC-β) in adult dog cardiac ventricles. The only MyHC isoform that was not identified was the fastest migrating band. MS results suggested that this protein was similar to MyHC-I. However, its migration was distinctly faster than MyHC-I. This protein was consistently expressed at higher levels in samples from the orbital layer, compared to the global layer (described later). Furthermore, this MyHC isoform was detected in most of the orbital fibers but was never exclusively expressed in single fibers. It is unlikely that this protein is a proteolytic fragment of MyHC-I, because it was observed at only very low levels in samples from the global layer, in which the level of MyHC-I is as high as in the orbital layer. Furthermore, this isoform was detected in fibers from the orbital layer that expressed only fast-type MyHC isoforms, as well as fibers expressing MyHC-I. It seems very unlikely that all the MyHC-I in the former fibers would have been proteolytically degraded. We, therefore, conclude that this is an additional MyHC isoform or a fragment of a different MyHC (from the MF 20 immunoblot) and that its identity remains to be determined. It is designated in this report as MyHC-Unidentified (MyHC-Un).