γC-crystallin was labeled with
125I by the chloramine T method.
22 Free
125I and small peptides were removed by centrifugation with microconcentrators (Centricon 10; Amicon, Beverly, MA). Degradation of γC-crystallin was assayed essentially as described by Huang et al.
23 but using bovine lens fiber supernatant or rabbit reticulocyte lysate as the source of ubiquitinating and proteolytic enzymes. Briefly, the proteolysis reaction mixture, in a final volume of 25 μL, contained 30 mM Tris-HCl (pH 7.6), 5 mM MgCl
2, 1 mM DTT, and 15 μL lens fiber lysate (150 mg/mL protein), or reticulocyte lysate (300 mg/mL protein). For determination of ATP- and Ubc4-dependent proteolysis, 2 mM ATP, 10 mM creatine phosphate, 6 μg of creatine phosphokinase and 0.4 μg of recombinant Ubc4 were included in the assay. The latter was expressed and purified essentially as described by Wing and Jain.
37 Pilot experiments suggested that there is sufficient free ubiquitin in lens and reticulocyte lysates; therefore, no exogenous ubiquitin was added in these assays. Degradation was initiated by addition of 4 to 10 × 10
4 cpm of
125I-labeled γC-crystallin, and the reaction mixtures were incubated at 37°C for 90 minutes. The reaction was terminated by addition of 200 μL ice-cold 10 mg/mL bovine serum albumin, immediately followed by 50 μL of 100% TCA (yielding a final concentration of 18.2% TCA), after which the samples were left on ice for 10 minutes. The extent of degradation was determined as the amount of TCA-soluble
125I-labeled fragments of γC-crystallin. The total TCA-insoluble count at time 0 was defined as 100%. The degradation observed with the addition of ATP and Ubc4 is referred to as total degradation, whereas the difference between total degradation and degradation without addition of ATP and Ubc4 is denoted as ATP-/Ubc4-stimulated degradation. All experiments were performed in triplicate and typically repeated twice. For statistical analysis, data from several experiments were pooled and Student’s
t-test with the Bonferroni correction for multiple comparisons was used. P < 0.025 (due to the Bonferroni correction) was considered statistically significant.