For light microscopy, native and bioengineered corneas were fixed in 4% formaldehyde, dehydrated in an ethanol series, and embedded in paraffin. Cross sections were cut, 4 μm thick, stained with hematoxylin and eosin or Alcian blue, and examined with a light microscope.
The expression of α-gal epitope and aldehyde dehydrogenase 1 (ALDH1) was determined by fluorescence immunohistochemistry, using paraffin-embedded tissue sections corresponding to NPCs, APCs, and RCs.
First, paraffin was removed from the tissue sections, using xylene, and the samples were rehydrated in water through a graded series of alcohols (100%, 96%, 70%, 50%, and water). Then we used a 0.01 M citrate buffer (pH 6.0) at 95°C for 10 minutes for antigen retrieval. After blocking any unspecific binding sites using bovine serum albumin, we incubated the samples with the primary antibodies for 1 hour at room temperature. Mouse monoclonal antibodies against the α-gal epitope (ALX-801-090-L002, clone M86; Alexis Biochemicals, Lausen, Switzerland) were applied 1:20. Goat polyclonal antibody against ALDH1 (PC713, purified goat polyclonal antibody; Calbiochem, Darmstadt, Germany) was used 1:300. Incubation with secondary antibodies was carried out for 30 minutes using FITC-conjugated anti-mouse antibody (F9137, dilution 1:500; Sigma-Aldrich, St. Louis, MO) or CY3-conjugated anti-goat antibody (C-2821, dilution 1:500; Sigma-Aldrich). Finally, the slides were counterstained with DAPI and photographed by light microscope (Eclipse i90; Nikon, Tokyo, Japan).
To determine the efficiency of both the decellularization and the recellularization methods, histologic images corresponding to each tissue type were obtained. Then, the number of remaining nuclear debris (60 decellularized corneas: 30 treated with NaCl and 30 treated with SDS) and the number of keratocytes (20 recellularized corneas) were determined per each field, by using imaging software (NIS-Elements; Nikon) in the automatic detection mode, taking into account that 12 microscopic fields per sample were used for the statistical analysis. All values obtained in this work corresponded to corneal stroma fields of 2700 μm2.