TM tissues or endothelial cell cultures were homogenized and lysed in 1× radioimmunoprecipitation assay (RIPA) buffer (150 mM NaCl, 1% Igepal [Sigma, St. Louis, MO], 0.5% sodium deoxycholate, 0.1% SDS, 50 mM Tris, pH 8.0) with protease inhibitors (25 mTIU/mL aprotinin, 0.05 mg/mL phenylmethylsulfonyl fluoride, 1 mM EDTA, 1 mM EGTA, 1 μg/mL leupeptin, and 1 mM sodium orthovanadate to a final volume of 1 mL with RIPA buffer). Immunoblot analysis was performed to determine relative protein levels. Equal amounts of total protein from tissues, cell lysates, or conditioned media were mixed with 2× reducing buffer (125 mM of Tris-HCl, pH 6.8, 4% SDS, 20% glycerol, 0.01% bromophenol blue) at a 1:10 ratio and were boiled at 100°C for 3 minutes with reducing (5 mg/mL dithiothreitol) or nonreducing conditions. The samples were analyzed using 10% PAGE. SDS-PAGE was performed at 100 V in tank buffer (250 mM Tris, 192 mM glycine, and 0.1% SDS) using vertical electrophoresis (XCell SureLock Mini-Cell; Invitrogen). The separated proteins were transferred onto a nitrocellulose membrane with 0.45-μm pore size (Invitrogen) in blotting buffer (250 mM Tris, 192 mM glycine, and 10% methanol). The membrane was incubated for 1 hour in 0.5× blocking buffer (Rockland, Gilbertsville, PA) at room temperature. The membrane was then incubated with a primary antibody in 0.5× blocking buffer overnight at 4°C. The next day, the membrane was washed three times with TBS/T (50 mM Tris-HCl, 150 mM NaCl, 0.05% Tween 20) for 10 minutes and then incubated with contrast agent (IRDye 800; Li-Cor Biosciences, Lincoln, NE)–conjugated donkey anti-goat IgG (1:10,000) or goat anti-rabbit IgG (1:10,000; Rockland) for 1 hour. The membrane was washed with 1× TBS/T three times at room temperature for 10 minutes and was scanned (Odyssey Infrared Imaging System; Li-Cor Biosciences). The band density of proteins was quantified using densitometric software (Odyssey, version 1.2; Li-Cor Biosciences). The primary antibodies used in this experiment are listed in
Table 2.