Animals were anesthetized with intraperitoneal injection of ketamine 10% (0.65 mL/kg; Inresa, Freiburg, Germany) and xylazine 2% (0.35 mL/kg; Albrecht; Aulendorf, Germany). The pupils were dilated with tropicamide (5 mg/mL; Mydriaticum Stulln; Pharma Stulln, Stulln, Germany) and animals were placed on a custom-made platform, positioned below the fixed OCT probe, set in a 30° position, which ensured that the incident OCT beam was perpendicular to the cornea. Additionally, the visualization of the eye was performed through a color digital camera (Thorlabs HL-AG; Lübeck, Germany) during alignment and centering. The image acquisition was controlled with custom-made software (based on Labview software and developed by Thorlabs HL-AG, Lübeck, Germany), which displays the OCT image in real time and the color camera image of the eye. As a coupling fluid, ultrasound gel was applied both to the cornea and to the OCT probe, which prevented cornea dehydration and cataract formation and reduced friction between OCT lens and the eye. Cross-sectional imaging of the retina was performed using a spectral radar OCT instrument (OCT900SR-HR; Thorlabs Inc., Newton, NJ) based on the detection of optical path differences, incorporating a broadband light source with a high-speed spectrometer. Optical properties of the retinal sample were determined by analyzing the back-reflected and scattered light from an illuminated retinal area. The light of a broadband low-coherence light source (center wavelength 930 nm) was guided to the sample with a small focus to get an illuminated volume with a small lateral dimension (2 or 4 mm). The OCT imaging engine consisted of 1000 lines/mm transmission grating and a 16-bit line-scan charge-coupled device camera (Thorlabs Inc.). By the imaging speed of 1100 axial scans per second (1.1 kHz) the complete raster scan, consisting of 50 scanning steps, took approximately 45 seconds. At this operating condition, the measured sensitivity was approximately 95 dB. The calibrated axial resolution was 6.36 μm in the air and approximately 4.7 μm in the tissue. The interference spectrum was converted from wavelength to frequency and axial scan data were obtained by fast Fourier transformation. The whole procedure, including the initial alignment of the animal, took approximately 5 to 10 minutes per eye. During this time, ultrasound gel was reapplied occasionally. None of the animals developed cataracts due to corneal dehydration.
To monitor retinal degeneration during optic neuritis, animals were separated into four groups containing five animals each and OCT scan was performed periodically at Day 7 post immunization (p.i.), at the day of disease onset (EAEd1) and at days 8 (EAEd8) and 14 of EAE (EAEd14).