To ascertain the extent of RGC loss, retinal whole mounts processed for in situ hybridization of Sncg and immunohistochemistry for pNF were imaged at 20× magnification and were used to generate mosaic composites of the retina surface (
Fig. 2A). Control retinas (e.g.,
Fig. 2A, left) showed a relatively uniform density of Sncg+ cells throughout and had few or no pNF+ RGCs. By 10 days after lasering (e.g.,
Fig. 2A, middle), retinas had areas with reduced Scng + cell density, alternating with areas of normal or near normal density. These same retinas had many pNF+ RGCs, and most of these were of the weak variety (green dots) with far fewer of the strong variety (red dots). By 29 days after lasering (e.g.,
Fig. 2A, right), the density of Sncg+ cells was lower than by 10 days, though some retinas had sectors that retained relatively higher densities. By 29 days, there were also large numbers of pNF+ RGCs, and most of these were of the strong variety with far fewer of the weak variety. Indeed, there was a consistent large difference in proportions of weak and strong pNF+ RGCs between 10 and 29 days (
Fig. 2B;
P < 0.0001,
t-test): 3.8% ± 1.7% of the pNF+ RGCs were of the strong variety at 10 days (
n = 3) and 85.9% ± 2% were of the strong variety at 29 days (
n = 3). Based on automatic counts of Sncg-labeled objects (
Figs. 2C,
2D), lasering significantly decreased (
P < 0.0001, one-way ANOVA) the number of RGCs. The number of Sncg+ cells was 100,318 ± 5,601 in control retinas (
n = 3), decreased (
P < 0.05, Tukey's multiple comparison test) to 68,807 ± 15,804 by 10 days (
n = 4) and decreased even further (
P < 0.01, Tukey's multiple comparison test) to 13,947 ± 4,233 by 29 days (
n = 4). The total number of pNF+ RGCs (weak plus strong) per retina was 2 ± 3 in control retinas, 5,142 ± 1,298 at 10 days, and 1,682 ± 436 at 29 days after lasering (
Fig. 2C). Thus, lasering produced a significant increase in the number of pNF+ RGCs (
P < 0.0001, one-way ANOVA), which was highest 10 days after lasering. Based on the counts of Sncg+ cells and pNF+ RGCs, the percentage of remaining RGCs with somatic pNF was 0.001 ± 0.002 in control retinas, 8 ± 3 at 10 days, and 12 ± 1 at 29 days after lasering (
Fig. 2D). Thus, lasering also produced a significant (
P < 0.001, one-way ANOVA) increase in the percentage of RGCs with somatic pNF that was highest at 29 days.