After the enucleation, the cornea, lens, and vitreous were removed. The retinas were fixed in 4% paraformaldehyde in phosphate buffer (PB) for 30 minutes. The expression of GFP was examined in retinal wholemounts and in vertical sections.
For cryostat sections, the retinal tissues from the nasal, superior, or inferior sector were cryoprotected in graded sucrose (10%, 20%, and 30% wt/vol, respectively, in PB) and cut at 20 μm. Sections were blocked for 1 hour in a solution containing 5% membrane-blocking agent (Chemiblocker; Chemicon, Temecula, CA), 0.5% Triton X-100 and 0.05% sodium azide (Sigma-Aldrich, St. Louis, MO). Primary antibodies were diluted in the same solution and were applied overnight, followed by incubation (1 hour) with secondary antibodies conjugated to Alexa 594 or Alexa 555 (red fluorescence; Molecular Probes, Eugene, OR) and Alexa 488 (green fluorescence; Molecular Probes) dyes. All steps were performed at room temperature (RT). We used the following antibodies: rabbit anti-GFP (1:2000, cat. no. A21311; Molecular Probes); goat anti-choline acetyltransferase (ChAT, 1:12,000, cat. no. AB144P; Chemicon), mouse anti-calretinin (1:30000, cat. no. MAB1568; Chemicon), mouse anti-protein kinase Cα (PKC, 1:160000, cat. no. sc8393; Santa Cruz Biotechnology, Santa Cruz, CA), goat anti-glycine transporter 1 (Glyt1, 1:20000, cat. no. AB1770; Chemicon,), mouse anti-glutamic acid decarboxylase 65 (GAD65 1:12000, cat. no. MAB351; Chemicon), mouse anti-glutamic acid decarboxylase 67 (GAD67 1:2000, cat. no. MAB5406; Chemicon), and goat anti-Brn3 (1:3000, cat. no. sc6026; Santa Cruz Biotechnology).
We first counted the density of the cells in the ganglion cell layer (GCL) based on DAPI staining. Retinal wholemounts were stained for 20 minutes in 5 μM DAPI. The tissue was rinsed in PB, flat mounted, coverslipped, and viewed under a microscope. Compression of the retina was avoided by intercalating filter papers between the slide and the coverslip. For simplicity, the retinal sectors were divided into six regions (
Fig. 1A and 1G, marked by lines) distributed equidistantly every 1.3 mm from the optic nerve head (region 1) to the periphery (region 6). Only the nasal, superior, or inferior sectors of the retina were examined. The temporal sector was excluded from the analysis because of the presence of the injection site and the fovea. The optic nerve head is located approximately 2-mm nasal to the fovea; therefore, we assessed GFP expression starting approximately 2 mm away from the center of the fovea. The maximum ganglion cell density in the marmoset retina is within 2 mm from the fovea, and the decline in the cell density is much shallower farther away from it.
32 There was no or very low expression of GFP within 2 mm from the center of the fovea, except for the region within ∼0.4 mm from the center. Within each of these six regions, smaller areas of 0.15 mm
2 were randomly chosen for cell counting. The number of the DAPI-labeled cells was averaged from several small areas and converted to cells per square millimeter. There was no significant difference in cell density in the corresponding regions between the two age groups A and B, and the data are therefore combined in
Table 2. Similar to other investigators, we did not count the endothelial cells.
40 Our results thus represent a mixture of ganglion cells (GCs) and displaced amacrine cells. GFP-positive cells were also counted and averaged in the chosen areas. The percentage of the GFP-positive cells in each of the six regions was calculated and is presented as the mean ± SD.
For the study of individual GCs, retinal wholemounts were blocked for 1 hour at RT. Primary antibodies against GFP and ChAT were then applied for 10 days at 4°C, followed by secondary antibodies overnight. Each wholemount sector was mounted and coverslipped, with filters used as the support. GC analysis was limited to the eccentricities ≥2 mm, and the distances from the fovea were calculated. The level of dendritic stratification was estimated as a percentage of the inner plexiform layer (IPL). Using a ×20 objective, we noted the
z-scale positions of OFF-ChAT–positive cell somas (designated 0% IPL) and ON-ChAT–positive cell somas (designated 100% IPL). The border between the ON- and OFF-sublaminae was defined in the middle (50%) of the IPL.
41
All images were made with a microscope (Axioplan 2; Carl Zeiss Meditec, Inc., Dublin, CA) equipped with an oscillating grating (Apotome; Carl Zeiss Meditec, Inc.). Image projections were made by collapsing individual z-stacks of optical sections into a single plane. For double labeling, the concentrations of the primary antibodies were adjusted to prevent the “bleeding through” of the fluorescence signal from one channel into another. Brightness and contrast were then adjusted (Photoshop CS4; Adobe Systems, San Jose, CA).