Matrix Genes and Matrix Assembly Genes | | | |
Elastin (ELN) | NS | NS | NS |
Biglycan (BGN) | ↓ −0.45 ± 0.02-fold, P = 0.033 | NS | ↑ 3.27 ± 1.4-fold, P = 0.045 |
Collagen type I, alpha 1 (COL1A1) | ↓ −0.59 ± 0.16-fold, P = 0.033 | NS | ↑ 2.80 ± 0.04-fold, P = 0.001 |
Collagen type I alpha 2 (COL1A2) | NS | NS | NS |
Collagen type III alpha 1 (COL3A1) | NS | NS | NS |
Collagen, type IV, alpha 2 (COLAA2) | NS | NS | NS |
Collagen, type IV, alpha 3 (COLAA3) | ↓ −0.62 ± 0.10-fold, P = 0.05 | NS | NS |
Collagen type V alpha 1 (COL5A1) | ↓ −0.51 ± 0.12-fold, P = 0.006 | NS | ↑ 2.71 ± 0.24-fold, P = 0.038 |
Collagen type V alpha 2 (COL5A2) | NS | NS | NS |
Collagen type VI alpha 3 (COL6A3) | NS | NS | ↑ 2.32 ± 0.756-fold, P = 0.047 |
Collagen, type VIII, alpha 2 (COL8A2) | ↓ −0.28 ± 0.06-fold, P = 0.008 | NS | ↑ 4.63 ± 1.57-fold, P = 0.021 |
Collagen type XI alpha 1 (COL11A1) | NS | NS | NS |
Collagen type XIII alpha 1 (COL13A1) | NS | NS | NS |
Collagen, type XIV, alpha 1 (COL14A1) | ↓ −0.42 ± 0.03-fold, P = 0.034 | NS | NS |
Collagen type XVI alpha 1 (COL16A1) | NS | NS | NS |
Collagen type XVIII alpha 1 (COL18A1) | ↓ −0.61 ± 0.11-fold, P = 0.011 | NS | ↑ 3.42 ± 0.64-fold, P = 0.002 |
Versican (chondroitin sulfate proteoglycan 2) | NS | NS | ↑ 3.55 ± 0.62-fold, P = 0.008 |
Perlecan (heparan sulfate proteoglycan) | NS | NS | NS |
Tenascin XB (TXB) | NS | NS | NS |
Fibulin 1 (FBLN1) | NS | NS | NS |
Fibronectin (FN1) | NS | NS | NS |
Laminin alpha 3 (LAMA3) | NS | NS | NS |
Dystrophin (DMD) | ↓ −0.57 ± 0.08-fold, P = 0.008 | NS | NS |
CRTL-1 (HAPLN1) | NS | NS | NS |
SPARC | ↓ −0.63 ± 0.11-fold, P = 0.001 | NS | NS |
Nidogen (NID1) | NS | NS | NS |
Microfibril-associated glycoprotein-2 (MFAP2) | NS | NS | NS |
Enzymatic/Chaperone Inducers of Collagen Assembly | | | |
Heat shock protein 47 (HSP47) | NE | NE | NE |
Lysyl oxidase (LOX) | NS | NS | NS |
ADAM TS1 | NS | NS | NS |
ADAM TS3 | NS | NS | NS |
ADAM2 | NS | NS | NS |
ADAM7 | NS | NS | NS |
ADAM8 | NS | NS | NS |
ADAM9 | NS | NS | NS |
MMP-1 | NS | NS | NS |
MMP-2 | NS | NS | ↑ 4.35 ± 1.6-fold, P = 0.031 |
MMP-9 | NE | NE | NE |
MMP-14 | ↑ 1.52 ± 0.25-fold, P = 0.033 | NS | ↑ 2.5 ± 0.65-fold, P = 0.017 |
TIMP-3 | NS | NS | ↑ 3.99 ± 1.47-fold, P = 0.02 |
TGF-b (Ligands, Receptors and Binders) | | | |
Transforming growth factor 1 (TGFB1) | NS | NS | ↑ 4.21 ± 1.38-fold, P = 0.016 |
Transforming growth factor 2 (TGFB2) | NS | NS | NS |
Latent TGF-β binding protein 4 (LTBP1) | NS | NS | NS |
TGF-β type 1 receptor (TGFBR1) | NS | NS | ↑ 2.80 ± 0.49-fold, P = 0.008 |
TGF-β type 2 receptor (TGFBR2) | NS | NS | NS |
Betaglycan receptor (TGFBR3) | NS | NS | NS |
Endoglin (ENG) | NS | NS | ↑ 2.47 ± 0.68-fold, P = 0.035 |
Thrombospondin 1 (THBS1) | NS | NS | NS |
Decorin (DCN) | NS | NS | ↑ 2.28 ± 0.92-fold, P = 0.049 |
Other Growth Factors (Fibrosis) | | | |
Connective tissue growth factor (CTGF) | NS | NS | NS |
Bone morphogenetic protein 7 (BMP-7) | NE | NE | NE |
Fibroblast growth factor 2 (bFGF) | NS | NS | NS |
Epidermal growth factor (EGF) | NS | ↑ 2.53 ± 0.87-fold, P = 0.033 | NS |
Vascular endothelial growth factor A (VEGF) | NS | NS | ↑ 3.16 ± 1.06-fold, P = 0.02 |
PreproEndothelin-1 (EDN1) | NS | NS | NS |
Angiotensinogen (AGT) | NS | NS | NS |
Angiotensin I converting enzyme (ACE) | NS | NS | NS |
Renin (REN) | NE | NE | NE |
Fibroblastic Activation Markers | | | |
S100 calcium binding protein A4 (S100A4) | NS | NS | NS |
Vimentin (VIM) | NS | NS | NS |
Alpha smooth muscle actin (ACTA1) | NS | NS | NS |
Periostin (POSTN) | NS | NS | NS |