At 14 days after silver nitrate cauterization, rats were euthanized with an intramuscular injection of ketamine (40 mg/kg) and xylazine (8 mg/kg), and the corneas from the treated eyes were harvested. To quantify VEGF and Flk-1 protein expression, neovascularized areas of equal size (3.0 × 3.0 mm) were dissected from each cornea, frozen at −70°C, and then homogenized in 200 mL of ice-cold buffer solution containing 1 mM EDTA, 10 mM Tris, pH 7.6, 0.1 M NaCl, 1 mg/mL aprotinin, and 100 mg/mL phenylmethylsulfonyl fluoride. The samples were clarified by centrifugation for 5 minutes at 13,000 revolutions per minute, and the supernatants were collected. The protein concentration was measured with Bio-Rad Bradford total protein assay reagent (Bio-Rad, Hercules, CA) and adjusted to 1.0 mg of protein in 200 mL of buffer. Then, the protein was rinsed with cold PBS and lysed with lysis buffer (20 mM Tris, pH 7.4, 150 mM NaCl2, 1 mM EGTA, 1 mM EDTA, 1% Triton X-100, 2.5 mM sodium pyrophosphate, 1 mM orthovanadate, 1 mM phenylmethylsulfonyl fluoride, 1 μg/mL leupeptin, and 10 μg/mL aprotinin). Identical amounts of the protein lysates were resolved by 4–12% SDS-PAGE and electroblotted onto nitrocellulose membranes (Invitrogen, San Diego, CA). The membranes were blocked with 5% skim milk in PBS and then incubated overnight with anti-VEGF antibody (1:5000). For MMP-2 evaluation, anti-mmp2 (Santa Cruz, Santa Cruz, CA; 1:500)
, and anti-α-tubulin (Santa Cruz; 1:500) were used as primary. The following secondary antibodies and dilutions were used to detect primary antibodies: anti-goat (Santa Cruz; 1:2000), anti-rabbit (Santa Cruz; 1:1000), and anti-mouse (Santa Cruz; 1:1000). Bound antibodies were visualized using enhanced chemiluminescence solution (ECL reagent; Santa Cruz, CA).