Following the designated culture period, primary and immortalized human meibomian gland epithelial cells were treated with 0.25% trypsin and EDTA (Invitrogen-Gibco), washed with PBS twice, then centrifuged. Cell pellets were stored at −80°C until thawing for lipid analyses. Lipids were extracted by the method of Folch et al.
13
For neutral lipid (i.e., cholesterol, cholesterol esters, wax esters) analysis, a lipid aliquot (100 μg) was further extracted with a Bond Elut NH2 Solid Phase Extraction 50 mg cartridge (Agilent Technologies, Columbia, MD, USA). In brief, the aliquot was dried, resuspended in 1:1 hexane:isopropanol and applied to the conditioned cartridge. The flow-through was collected, dried, resuspended in mobile phase A, and injected with internal standards into a LUNA C18(2) 100Å 150 × 1.00 mm HPLC column (Phenomenex, Torrance, CA, USA) using a Surveyor Autosampler and LC-pump (Thermo Fisher Scientific, Waltham, MA, USA), and analyzed in triplicate. Elution of the C18 column was performed with (A) 95% methanol, 5% 100 mM ammonium formate, pH 4.75 and (B) 95% isopropanol, 5% 100 mM ammonium formate, pH 4.75. The flow rate was set at 50 μL/min and the gradient was: 0 minutes 50% B, 5 minutes 50% B, 20 minutes 100% B, 95 minutes 100% B, 96 minutes 0% B with a 24-minute re-equilibration time at each run's end. Full scan spectra from a mass spectrometer (MS) were obtained by using a positive ion electrospray MS and a Orbitrap Velos Pro (Thermo Fisher Scientific) at 60,000 resolution. Neutral lipid standards used in these analyses included 1-heptadecanoyl-rac-glycerol (17:0 MG) > 99%; 1,2-dilauroyl-sn-glycerol (12:0/12:0 DG) > 99%; 1,3-ditetradecanoyl-2-(9Z-hexadecenoyl)-glycerol (14:0/16:1/14:0 TG) > 99%; cholest-5-en-3β-yl pentadecanoate (15:0 cholesterol ester) > 99%; and 1-oleoyl-N-heptadecanoyl-D-erythro-sphingosine (17:0/d18:1 Ceremide) > 99% (Avanti Lipids, Alabaster, AL, USA); cholesterol-D7 > 98% (Cambridge Isotope Lab, Andover, MA, USA); and oleyl laurate wax ester (Nu-Check-Prep, Inc., Elysian, MA, USA). The neutral lipids standards were mixed to 0.4 ng/μL triglycerides, 1 ng/μL diglyceride/cholesterol ester/wax ester, 2 ng/μL monoglyceride/ceremide, and 20 ng/μL cholesterol, and then diluted 1:1 with the sample extract. Statistical analysis of cholesterol levels was performed with Student's unpaired t-test.
For polar lipid analysis, a lipid aliquot (10 μg) and an internal standard mixture were injected into a LUNA 3 μ Silica(2) 100Å 150 × 1.00 mm column (Phenomenex) using a Surveyor Autosampler and LC-pump (Thermo Fisher Scientific), and analyzed by light chromatography/mass spectrometry (LC/MS) in triplicate and LC/MS
2/MS
3 in singlicate. Elution of the Silica column was carried out with (A) 58:40:02, isopropanol:hexane:100 mM ammonium formate, pH 4.75 and (B) 50:40:10, isopropanol:hexane:100 mM ammonium formate, pH 4.75. The flow rate was 50 μL/min and the gradient was: 0 minutes 0% B, 15 minutes 0% B, 40 minutes 100% B, 50 minutes 100% B, 51 minutes 0% B, with a 40-minute re-equilibration time at the end of each run. Full scan MS spectra were obtained using negative ion electrospray MS and a LTQ Orbitrap Velos (Thermo Fisher Scientific) at 60,000 resolution. The data-dependent MS
2 and MS
3 scans were acquired on the most intense fragment ion of the top 5 intense ions in the full MS spectra. This process was used to facilitate the identification of the fatty acid composition of individual polar lipid molecular species. The chromatographic elution time for each lipid group was determined by observing the elution of the internal standard and the highest molecular weight species. The extracted ion current of each lipid molecular species was processed with SIEVE software (Thermo Fisher Scientific), and the lipid identity was determined by the retention time and exact mass (5 parts per million [ppm]). Identities were verified by using the fragment ions and the extracted ion chromatogram profiles. The phospholipid standards purchased from Avanti Lipids included: dimyristoyl phosphocholine (14:0/14:0 PC) > 99%; dimyristoyl phosphoethanolamine (14:0/14:0 PE) > 99%; dimyristoyl phosphoserine (14:0/14:0 PS) > 99%; dimyristoyl phosphoglycerol (14:0/14:0 PG) > 99%; dimyristoyl phosphate (14:0/14:0 PA) > 99%; dilauroyl sphingosylphosphocholine (d18:1/12:0 SM) > 99%;1-myristoyl phosphate (14:0 LPA) > 99%; 1-heptadecenoyl phosphoserine (14:0 LPS) > 99%; 1-myristoyl phosphoethanolamine (14:0 LPE) > 99%; and 1-myristoyl phosphoglycerol (14:0 LPG) > 99%. The polar lipids standards were mixed to 0.1 ng/μL of PG, 1 ng/μL of PE, 2 ng/μL of LPG/LPE/PS/LPS/LPA/SM, and 20 ng/μL of PA/PC.
For all lipid groups except phosphatidylcholine, lysophosphatidylcholine, and sphingomyelin, the ion detected was the molecular species minus one proton. For the excepted species, the ion detected was the molecular ion minus methane plus acetate. The average intensities of all ions were obtained from four replicate measurements.