LEDGF cDNA was inserted into a pGEX-2T vector to produce a
glutathione-
S-transferase (GST)-LEDGF fusion protein. First,
a 564-bp PCR fragment was generated that covered the initiation codon
ATG and extended to an internal
EcoRI site of LEDGF. Two
primers (the 5′-primer 5′-ccccggatcccatgactcgcgatttcaaacct-3′, and the
3′-primer 5′-tcttgaattctgtagctgcaggtcgtcctct-3′ were used with LEDGF
cDNA to generate the fragment. After the PCR product was cleaved with
restriction enzymes
BamHI and
EcoRI, the PCR
fragment was ligated between the
BamHI and
EcoRI
sites of pGEX-2T. Next, a
XhoI and an
EcoRI
fragment (2153 bp) was generated from LEDGF cDNA and ligated between
the
XhoI and
EcoRI sites of the previous
construct.
E. coli (BL21) was transformed with the construct
and incubated in 500 ml of Luria broth (LB) medium (tryptone 10 g,
yeast extract 5 g, and NaCl 5 g/l containing 100 μg ampicillin
per milliliter) at 37°C with shaking until the optical density of the
culture reached 0.6 (OD
600nm). IPTG was then
added at a final concentration of 100 μM and the incubation continued
for 5 to 6 more hours. To make the lysate, the pellet was suspended in
25 ml lysis buffer (final concentrations: 50 mM Tris-HCl [pH 8.0] 200
mM NaCl, 1.5 mM EDTA) and 1 mM PMSF. Lysozyme was added (final
concentration, 1 mg/ml) and the mixture kept on ice for 15 minutes The
lysate was sonicated with short bursts, Triton X-100 was added to a
final concentration of 1%, and the lysate was mixed gently for 30
minutes to solubilize the fusion protein. The lysate was centrifuged at
12,000 rpm for 10 minutes at 4°C. To purify the fusion protein, the
supernatant was incubated overnight with 200 μl of a 50% slurry of
glutathione-Sepharose 4B at 4°C. The suspension was then centrifuged
at 500
g for 5 minutes. The pellet was washed four times in
lysis buffer and the fusion protein eluted with glutathione elution
buffer. The protein was dialyzed against 2000 volumes of
phosphate-buffered saline (PBS) at 4°C, the protein concentration was
determined by the Bradford method,
14 and identity of the
eluted protein was confirmed by sodium dodecyl sulfate–polyacrylamide
gel electrophoresis (SDS-PAGE), immunoblot analysis using a polyclonal
anti-GST, and an anti-(C-terminal) LEDGF antibody.