All experiments were conducted in accordance with the Animal
Care and Use Committee guidelines and the ARVO Statement for the Use of
Animals in Ophthalmic and Vision Research. Wistar–Kyoto rats were
anesthetized with diethyl ether and killed by cutting the axillary
artery. Systemic organs (cerebrum, cerebellum, eye, submandibular
salivary gland, heart, lung, liver, pancreas, small intestine, colon,
spleen, testis, ovary, kidney, and smooth muscle) were removed from
adult (3 months old), rib cartilage from newborn, and thymus from
1-month-old rats. Eyes were dissected into several compartments under a
microscope: extraocular muscle, conjunctiva, cornea, iris–ciliary
body, anterior chamber angle, lens, retina without retinal pigment
epithelium, and sclera with choroid and retinal pigment epithelium. The
tight association of the retinal pigment epithelium with scleral
compartments and the negligible attachment of the epithelium to retinal
compartments were certified by light microscopy. Total cellular RNA was
purified from these organs and eye compartments by a modified acid
guanidium thiocyanate phenol-chloroform extraction method (TRIzol;
Gibco–Life Technologies, Rockville, MD).
For immunohistochemistry and in situ hybridization, after enucleation
the eyes and the cartilage were immersed in 4% paraformaldehyde in
phosphate-buffered saline (PBS) for 4 hours and followed by immersion
in 30% sucrose in PBS overnight. The tissues were embedded in optimal
temperature cutting compound (Tissue-Tek; Miles, Elkhart, IN), frozen
in liquid nitrogen, and cut in a cryostat at −20°C. Specimens were
sectioned at 4 μm for immunohistochemistry and at 10 μm for in situ
hybridization, and mounted on slides coated with
poly-l-lysine. For immunohistochemistry of the vitreous
body, whole eyes were fixed in methyl-Carnoy fixative for 16 hours,
dehydrated in graded ethanol, embedded in paraffin, and sectioned at 4μ
m on poly-l-lysine–coated slides.