Informed consent was obtained from the subjects after an explanation of
this study. Genomic DNA was extracted from leukocytes of peripheral
blood from each patient. Exons 2, 3, 4, and 5 of the
RDH5 gene were amplified by polymerase chain reaction (PCR) using the DNA
Thermal Cycler 9700 (Perkin Elmer Applied Biosystems, Foster City,
CA). Primers were purchased from Life Technologies Oriental,
Inc. (Tokyo, Japan) following the sequences published previously by
Yamamoto et al.
9 Genomic DNA (200 ng) was PCR amplified in
50 μl reactions containing Amplitaq Gold
Taq DNA
polymerase (Perkin Elmer Applied Biosystems). The PCR conditions were
as follows: 5 minutes at 94°C, 35 cycles at 94°C for 30 seconds,
followed by 30 seconds at 50
o to 60°C (exon 2a,
3b, 5a, 50°C; exon 3a, 4, 5b, 54°C; exon 2b, 2c, 60°C), and 45
seconds at 72°C with a final extension step at 72°C for 7 minutes.
The PCR products were purified using High Pure PCR Purification Kit
(Boehringer Mannheim GmbH, Mannheim, Germany) and then directly
sequenced using a DNA sequencing kit (Dye Terminator Cycle Sequencing
Ready Reaction Kit; Perkin Elmer Applied Biosystems, Foster City, CA),
and an automated DNA sequencer (Model 373; Applied Biosystems, Foster
City, CA). Primers for the sequence reaction were the same as those for
the PCR reaction. All samples were sequenced on both sense and
antisense strands. To search for polymorphisms, the exons of the
RDH5 gene from 90 alleles (24 men and 21 women) from
unrelated normal Japanese individuals were directly sequenced. In
addition, all exons of
RDH5 gene from 10 patients with cone
dystrophy who did not have fundus albipunctatus were also examined.