Total RNA was isolated from 35-mm petri dishes by the
guanidinium thiocyanate–phenol–chloroform extraction method (RNA
isolation kit, Stratagene, Heidelberg, Germany). RNA (15 μg) was
denatured and size-fractionated by gel electrophoresis in 1% agarose
gels containing 2.2 M formaldehyde. The RNA was then vacuum-blotted
onto a nylon membrane (Boehringer Mannheim) and cross-linked (1600μ
J, Stratalinker; Stratagene). To assess the amount and quality of
the RNA, the membrane was stained with methylene blue. Images were
taken with the Lumi-Imager (Boehringer Mannheim). Prehybridizations
were performed at 68°C for 1 hour in Dig Easy Hyb (Boehringer
Mannheim). Hybridizations were at 68°C overnight in prehybridization
solution containing 50 ng/ml αB-crystallin–specific 450-bp antisense
riboprobe. Riboprobes were synthesized by using a combined polymerase
chain reaction (PCR). Briefly, a DNA fragment was amplified from cDNA
of TM cells using the reaction conditions and primers described
previously,
11 except that the downstream primer
(MWG-Biotech, Ebersberg, Germany) contained the sequence for the
T7-promoter. After purification with a Quiagen (Hilden, Germany) PCR
Purification Kit, 1 μg DNA was used as a template for in vitro
transcription using the digoxigenin labeling RNA Kit from Boehringer
Mannheim. Labeling efficiency was checked by direct detection of the
labeled RNA probe with anti–digoxigenin–alkaline phosphatase. After
hybridization, the membrane was washed twice with 2× SSC, 0.1% sodium
dodecyl sulfate (SDS) at room temperature, followed by two washes in
0.1× SSC, 0.1% SDS, for 15 minutes at 68°C. After hybridization and
posthybridization washes, the membrane was washed for 5 minutes in
washing buffer (100 mM maleic acid, 150 mM NaCl; pH 7.5; 0.3%
Tween-20) and incubated for 60 minutes in blocking solution (100 mM
maleic acid, 150 mM NaCl, pH 7.5, 1% blocking reagent, Boehringer
Mannheim). Anti–digoxigenin–alkaline phosphatase (Boehringer
Mannheim) was diluted 1:10,000 in blocking solution, and the membrane
incubated for 30 minutes. The membrane was washed four times, 15
minutes per wash, in washing buffer. The membrane was equilibrated in
detection buffer (100 mM Tris–HCl, 100 mM NaCl, pH 9.5) for 10
minutes. For chemiluminescence detection CDP-star (Boehringer Mannheim)
was diluted 1:100 in detection buffer, and the filter incubated for 5
minutes at room temperature. After air-drying, the semidry membrane was
sealed in a plastic bag. Chemiluminescence was detected with the
Lumi-Imager workstation. Exposure times ranged between 10 minutes and 1
hour. The quantification was performed with Lumi Analyst (Boehringer
Mannheim).