Fresh retinas were rapidly dissected and homogenized with an
electric pestle (Kontes, Vineland, NJ) in lysis buffer: 20 mM Tris (pH
8.0), 135 mM NaCl, 1% NP-40, 0.1% sodium dodecyl sulfate (SDS) and
10% glycerol supplemented with protease inhibitors (1 mM
phenylmethylsulfonyl fluoride, 10 μg/ml aprotinin, 1 μg/ml
leupeptin, and 0.5 mM sodium orthovanadate). After incubation for 30
minutes on ice, homogenates were centrifuged at 10,000 rpm for 10
minutes, and the supernatants were removed and resedimented for an
additional 10 minutes to yield solubilized extracts. Protein content
was determined with a protein assay kit (Bio-Rad, Hercules, CA).
Retinal extracts (100–150 μg) were resolved on 8% (for TrkB) or
15% (for BDNF) SDS-polyacrylamide gels and transferred to
nitrocellulose filters (Xymotech Biosystems, Montréal, Quebec,
Canada). To block nonspecific binding, filters were placed in 10 mM
Tris (pH 8.0), 150 mM NaCl, 0.2% Tween-20 and 5 g dry skim milk
for 1 hour at room temperature. Blots were incubated for 16 to 18 hours
at 4°C with primary antibodies followed by incubation in
peroxidase-linked secondary antibodies. Blots were developed with a
chemiluminescence reagent (ECL; Amersham Pharmacia) and exposed to
imaging film (X-OMAT; Eastman Kodak, Rochester, NY).