Purified protein antigens and carrier-free antibodies were labeled with fluorescent succinimidyl esters (Alexa Fluor green 488, red 594, or orange 546; Molecular Probes, Eugene, OR). The green fluorescent conjugates are significantly brighter than fluorescein conjugates and are much more photostable. The conjugations were accomplished by a simple incubation of the reagent with the protein according to the manufacturer’s instructions, followed by buffer exchange and protein concentration with ultrafiltration devices (Centricon-10; Millipore, Bedford, MA). Optical density measurements were used to calculate the efficiency of protein labeling and recovery according to the following formulas: protein concentration (M) = [A280 – (Af × Cf) × dilution factor]/εp; and moles dye per mole protein = Af × dilution factor/(εf × protein concentration) (A, absorbance; ε, molar extinction coefficient; Cf = A280/Af for the dye). εp is 203,000 for IgG and 31,000 for ovalbumin. For the green fluorescence conjugate, Af was measured at 494 nm, Cf = 0.11, and εf = 71,000. For the red conjugate, Af was at 590 nm, Cf = 0.56, and εf = 73,000. Optimum sensitivity with minimal background labeling was obtained when the bound dye/protein molar ratios were kept within the recommended values of 4 to 9 for the green conjugate and 2 to 6 for the red. Antibodies to MHC class II (anti I-Ad; Pharmingen, San Diego, CA), F4/80 (Serotec, Raleigh, NC), CD11b (Serotec), CD11c (Serotec), CD80 (Pharmingen), and CD86 (Pharmingen) as well as mouse (Pharmingen), hamster (Serotec), and rat (Serotec) IgG2b isotype controls were used in the study.