RPGR mutations, and in particular
RPGR ORF15 mutations, are a major cause of retinal degeneration,
1 2 3 4 5 6 7 8 9 10 11 12 21 22 23 and molecular diagnosis greatly facilitates genetic counseling and advice on prognosis. However, screening ORF15 presents a major technical challenge because of the repetitive and purine-rich nature of the DNA sequence. We have used a cloning strategy to obtain accurate bidirectional full sequence of ORF15 reproducibly which was both cost and time effective. The high level of polymorphism within ORF15, which can often lead to primer-specific amplification failure, is overcome with this method. Once the mutation had been identified within a family, specific primer pairs were then used to amplify and sequence the mutation in other family members. In this study, six unrelated affected males were initially screened for ORF15 mutations, and two of these families were found to harbor ORF15 mutations that segregated with disease. These two families can therefore be described as CORDX1 families. The
RPGR ORF15 mutations identified in both families were protein-truncating nonsense mutations located 3′ to the highly repetitive region of ORF15. It is worth noting that ORF15 mutations reported as a cause of CORDX1 are also at the 3′-end of ORF15; four of the mutations previously described were insertions and deletions resulting in frame shifts, and one was a nonsense mutation.
12 21 22 Similarly, an ORF15 nonsense mutation 3′ to the highly repetitive region was described as a cause of atrophic macular degeneration (although several affected male subjects in that pedigree had electrophysiological data consistent with a cone–rod dystrophy phenotype).
23 Our data strengthen the hypothesis that mutations 3′ to the highly repetitive region cause predominant cone dysfunction. However, exceptions exist to this rule, for example a frame-shift insertion detected 5′ to the repetitive region of ORF15 has been reported in a cone–rod dystrophy pedigree.
28 The significance of the distribution and mutation type is difficult to assess, since the numbers of families with CORDX1 are small in comparison with the large number of XLRP families with ORF15 mutations, and currently there are no functional tests for
RPGR. Recently, we and others have described
RPGR mutations causing an XLRP syndrome associated with hearing loss and recurrent respiratory tract infections, highlighting the expanding clinical spectrum of disease associated with
RPGR mutations.
29 30 31 Although none of the mutations described occur in ORF15, there was notable inter- and intrafamilial phenotypic variation, with no clear correlation with mutation type.
29 30 31 Questions are raised about the potential function of RPGR isoforms in different tissues and the consequence of different mutations, and it is hoped that future functional evaluation of this important protein will extend our understanding of mutation hotspots, environmental interplay, and genetic background.