The eyes and lids of mice in each group were excised, embedded in optimal cutting temperature (OCT) compound (VWR, Suwanee, GA), and flash-frozen in liquid nitrogen. Sagittal 8-μm sections were cut with a cryostat (HM 500; Micron, Waldorf, Germany) and placed on glass slides that were stored at −80°C. Tissue sections were used for immunohistochemistry, as previously described.
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Tissue sections were fixed with either cold 95% ethanol for detection of CD45, CD11b, or cold acetone at −20°C for 5 minutes for detection of CD4, CD8, myeloperoxidase, interleukin (IL)-4, and IFN-γ. After fixation, endogenous peroxidases were quenched with 0.3% H2O2 for 10 minutes. The sections were sequentially blocked with avidin-biotin (Vector Laboratories, Burlingame, CA) for 10 minutes each. After the reaction was blocked with 20% normal goat serum (NGS) in PBS for 45 minutes, primary rat monoclonal antibodies against CD45 (clone 30-F11, 10 μg/mL), CD11b (clone M1/70, 6.25 μg/mL), CD4 (clone H129.9, 10 μg/mL), or CD8 (clone 53-6.7, 3.125 μg/mL) (all from BD Pharmingen, San Jose, CA); IL-4 (clone 11B11, 20 μg/mL) or IFN-γ (clone R4-6A2, 20 μg/mL) (all from Biolegend, San Diego, CA); or rabbit polyclonal sera against myeloperoxidase (1:400; Fremont, NeoMarkers, Fremont, CA) were applied and incubated for 1 hour at room temperature. After they were extensively washed, the sections were incubated with appropriate biotinylated secondary antibodies (all from BD Pharmingen), using streptavidin biotin (Vectastain Elite ABC Kit; Vector Laboratories), according to the manufacturer’s protocol. The samples were finally incubated with diaminobenzidine (DAB; NovaRed; Vector Laboratories) peroxidase substrate to give a red stain for 5 to 9 minutes (optimized for each antibody) and counterstained with Mayer’s hematoxylin. Secondary antibody alone and rat anti-mouse isotype (BD Pharmingen) controls were performed. Sections from six different right eyes per group per time point were examined and photographed with a microscope equipped with a digital camera (DXM 1200; Nikon).
The number of cells staining positively for each antigen was counted in tissue sections. Three sections (at least 100 μm apart) from six different animals of each strain and at each time point were evaluated. Positively stained cells were counted in the GC-rich area of the conjunctiva, over a length of at least 500 μm in the epithelium and to a depth of 75 μm below the epithelial basement membrane in the stroma, for a distance of 500 μm (Metavue 6.2r; Molecular Devices). Results were expressed as the number of positive cells per 100 μm. The CD4/CD8 ratio was calculated using the mean values obtained for both markers.