After enucleation, the tissues were fixed in 10% neutral-buffered formalin and processed for routine paraffin-embedded sectioning. ONs were embedded longitudinally or transversely. Some globes with ONs attached were embedded sagittally. In all cases, 5-μm serial sections were cut and stained for routine histologic analysis with hematoxylin and eosin (H&E), in a standard protocol. For immunohistochemistry, the tissue sections were deparaffinized, rinsed in 100% ethanol, and treated for 30 minutes with 0.5% H
2O
2 in methanol, to block endogenous peroxidase activity. Antigen retrieval was achieved by microwaving the sections in 10 mM citrate buffer (pH 6.0). For localization of the ECM proteins collagen I, collagen VI, and laminin, the sections were digested an additional 3 minutes with trypsin (0.25 g/L), to further unmask the antigen sites. The sections were then blocked in PBS containing 3% normal horse serum, incubated overnight at room temperature in primary antibody (containing 3% normal horse serum), and incubated consecutively with biotinylated secondary antibody (1:250; Vector Laboratories, Peterborough, UK) and streptavidin-peroxidase conjugate (1:1000; Pierce, Rockford, IL). Color development was achieved with 3′-,3′-diaminobenzidine. The sections were counterstained with hematoxylin, dehydrated, and mounted. The specificity of antibody staining was confirmed by incubating adjacent sections with isotype controls (mouse IgG1 and IgG2a, 50878 and 553454; BD Australia, North Ryde, NSW, Australia) for monoclonal antibodies or normal rabbit/goat serum for polyclonal rabbit/goat antibodies. In addition, positive control labeling was performed in appropriate rat brain tissue sections. Primary antibody details are given in
Table 1.
To verify which glial cell type(s) in the optic nerve was responsible for expression of the stress proteins nestin, Tau, heat shock protein (Hsp)-27, and αB-crystallin after 2VO, double labeling of these proteins was performed with markers for astrocytes (GFAP), oligodendrocytes/oligodendrocyte precursor cells (Olig-2), and microglia (Iba1). Visualization of one antigen was achieved with a three-step procedure (primary antibody, biotinylated secondary antibody, and streptavidin-conjugated AlexaFluor 488), whereas the second antigen was labeled by a two-step procedure (primary antibody and secondary antibody conjugated to AlexaFluor 594). In summary, the sections were prepared as described earlier, except for the omission of the endogenous peroxidase block, then incubated overnight at room temperature in various combinations of mouse anti-nestin, goat anti-Tau, mouse anti-αB crystallin, rabbit anti-Hsp-27, rabbit or mouse anti-GFAP, rabbit anti-Olig-2, and rabbit anti-Iba1. On the next day, sections were incubated with the appropriate biotinylated secondary antibody (1:250) for the three-step procedure plus the correct secondary antibody conjugated to AlexaFluor 594 (1:250; Invitrogen, Mulgrave, VIC, Australia) for the two-step procedure for 30 minutes, followed by streptavidin-conjugated AlexaFluor 488 (1:500; Invitrogen) for 1 hour. Both of these steps were performed in a darkened environment. Sections were then mounted in antifade medium (ProLong Gold; Invitrogen) and examined under a confocal fluorescence microscope.
For histologic analysis of optic nerve cross sections, intraorbital (termed proximal) and intracranial (termed distal) optic nerves from saline-perfused sham-surgery and 2VO rats were fixed by immersion in 2.5% glutaraldehyde with 4% paraformaldehyde in 0.1 M phosphate buffer (pH 7.4) for 24 hours at 4°C. Tissues were then placed in 2% osmium tetroxide in saline overnight and washed with cacodylate buffer at room temperature. Subsequently, they were dehydrated in graded alcohols and embedded in epoxy resin for transverse sectioning. Transverse sections (0.5 μm) were cut on an ultramicrotome, mounted on glass slides, and stained for myelin with 1% toluidine blue.