Chimeras were perfusion fixed at postnatal day (P)0 or P10 with 4% paraformaldehyde, and then eyeballs were cryoprotected in 30% sucrose solution and cryosectioned.
The reagents used for the immunostaining are as follows: a polyclonal rabbit anti-Pax6 (1:8000, Covance, Princeton, NJ) which recognizes the C-terminal portion of the protein which is absent in Pax6-null mutants; a monoclonal rat anti-CD34 (1:100, Abcam, Cambridge, MA) was used to identify vascular endothelial cells; a monoclonal mouse anti α-actin (1:1000, Chemicon, Temecula, CA) to identify the vascular pericytes; a monoclonal mouse anti β-tubulin III (1:5000, Covance) to identify retinal ganglion cells (RGCs); a monoclonal mouse anti syntaxin 1A isoform (HPC-1) (1:2000, Sigma-Aldrich, St. Louis, MO) to identify amacrine cells and horizontal cells; a monoclonal mouse anti-protein kinase C (PKC) α isoform to identify rod bipolar cells (1:5000, Santa Cruz Biotechnology, Inc., Santa Cruz, CA); a monoclonal mouse anti-ED1 (1:100, Serotec, Raleigh, NC) to identify microglia; and a polyclonal rabbit anti-GFAP (1:4 of Ready for Use; Thermo, Waltham, MA) and a monoclonal mouse anti GFAP (1:2000; Sigma-Aldrich, St. Louis, MO) to identify astrocytes. Biotinylated-horse anti mouse IgG, biotinylated-goat anti rabbit IgG, biotinylated-rabbit anti rat IgG, and horseradish peroxidase (HRP)-conjugate avidin-biotin complex (Vector Laboratories, Burlingame, CA) were used, followed by 3,3′-diaminobenzidine (DAB) staining and observation by light microscope. For immunofluorescent staining, Alexa Fluor 488 conjugate rabbit anti-GFP (1:1000), Alexa Fluor 568 conjugate streptavidin (1:1000), and TOTO-3 (1:500; Invitrogen-Molecular Probes, Eugene, OR), were used for double or triple labeling. The results were then observed by confocal microscope (Bio-Rad Laboratories, Hercules, CA).