This study was performed in agreement with the declaration of Helsinki on the use of human material for research. Postmortem human donor eyes were obtained from the Cornea Bank Amsterdam. In accordance with The Netherlands' law, the Cornea Bank Amsterdam ensured donors had consented to their eyes being used for scientific purpose.
Retinas were isolated by peeling away the sclera and corpus vitreous and fixed in 4% paraformaldehyde buffered in 0.1 M phosphate buffer (PB) pH 7.4 for 30 to 60 minutes. Retinas were cryoprotected in 12.5% sucrose in 0.1 M phosphate buffer for 30 minutes, then 1 hour in 25% sucrose in 0.1 M phosphate buffer before being frozen in embedding compound (TissueTek; Sakura Finetek Holland BC, Alphen aan de Rijn, The Netherlands).
For light microscopical (LM) purposes 10-μm thick sections were made and stored at −20 °C. Sections were first preincubated in 2% normal goat serum (NGS) for 30 minutes, then incubated with primary antibodies for 24 to 48 hours followed by 35 minutes of incubation with secondary antibodies at 37 °C. Optical examination (optical section thickness is 0.25 μm) was performed with a confocal laser scanning microscope (CLSM; Meta confocal miscroscope; Zeiss, Stuttgart, Germany).
The primary antibodies used were: TRPM1 (Sigma Aldrich Chemi BV, Zwijndrecht, The Netherlands) 1:200; calbindin (Swant, Marly, Switzerland) 1:500; mGluR6 (gift of Noga Vardi) 1:5000; Go (Chemicon, Hampshire, United Kingdom) 1:5000; Ribeye (BD Transduction Laboratories, Breda, The Netherlands) 1:1000; Bassoon (Stress Gen, Brussels, Belgium) 1:5000; PKCα (Sigma Aldrich Chemi BV) 1:200; and PKCβ (Sigma Aldrich Chemi BV) 1:200; diluted in 0.1 M phosphate buffered saline (PBS) containing 5% normal goat serum and 0.05% Triton. Secondary antibodies were visualized by means of goat anti-rabbit Cy3, 1:500, and goat anti-mouse Alexa 488, 1:500.
For electron microscopical (EM) purposes 40-μm thick sections were incubated with TRPM1 (1:200) in phosphate buffer for 48 hours, then rinsed before being incubated with rabbit peroxidase antiperoxidase (PAP) for 2 hours, rinsed, then developed in a 2,2′-diaminobenzidine (DAB) solution containing 0,03% H
2O
2 for 4 minutes. Afterward the gold substitute silver peroxidase
12 method was performed; sections were fixed in sodium cacodylate buffer (pH 7.4) containing 1% osmium tetra oxide and 1.5% potassium ferricyanide. Sections were then dehydrated and embedded in epoxy resin, ultrathin sections made, and examined with an electron microscope (FEI Technai 12; Fei Company, Eindhoven, The Netherlands).
For Western blot analysis, human retinas were homogenized with a nonstick pestle in ice-cold phosphate buffered saline containing one tablet of protease-inhibitor cocktail (Boehringer Mannheim GmbH, Mannheim, Ingelheim, Germany) per 25 mL. Proteins fractions were isolated by centrifuge (14,600
g), the supernatants and deposits were collected, sample buffer (Nu Page LDS; Invitrogen, Breda, The Netherlands) was added and then run on a gel (Nu Page 4–12% Bis Tris Cell; Invitrogen). Protein standards (Bio-rad Laboratories, BV, Veenendaal, The Netherlands) were run in adjacent lanes. Gels were electroblotted on blot membrane (PolyVinylideneDiFluoride; Millipore, Amsterdam, The Netherlands) overnight at 80 mA. Membranes were rinsed in a Tris buffer (0.5 M) containing NaCl (1.5 M) and 5% Tween-20, blocked in the same buffer containing 2% dry milk powder for 1 hour, then incubated in the primary antibodies against TRPM1 for 1 hour, washed in Tris-buffer, and incubated in goat anti-rabbit (IRDye 800 CW; 1:3000). Blots were examined on an Odyssey infrared detecting system. Western blot analysis showed a strong band between 150 kDa and 200 kDa (
Fig 1). The predicted molecular weight of TRPM1 is 182 kDa, suggesting that the band between 150 kDa and 200 kDa represents TRPM1. Two additional bands were seen; a strong band between 100 kDa and 150 kDa and a weaker band between 75 kDa and 100 kDa, which are most likely degradation products or alternative splicing variations of TRPM1.
For in situ hybridization (ISH) sections were stored at −80 °C. Hybridization was performed using TRPM1 specific, 5′-fluorescein-labeled 19mer antisense oligonucleotides containing locked nucleic acid (LNA) and 2′-O-methyl (2OME)-RNA moieties; TRPM1 (5′-TuuCccAaaGacTugTuuC-3′) and mGluR6 (5′-TguTccTgcGguTguTcuC- 3′), where locked nucleic acid residues are given in capital letters and 2′-O-methyl in lowercase. Sense probes were used as controls (TRPM1 5′-GaaAcaAguCuuTggGaaA-3′, mGluR6 5′-GagAacAacCgcAggAacA 3′). Probes were synthesized by Ribotask ApS, Odense, Denmark. Hybridization signals were detected by incubating the sections in blocking buffer containing anti-fluorescein-alkaline phosphatase (AP) Fab fragments (1:1000; Roche, Lewes, UK) for 1 hour at room temperature. AP signal was detected by using a substrate kit (Vector Blue AP Substrate Kit III; Vector, Burlingame, CA).
For details of sampling, RNA isolation, amplification, and PCR conditions see van Soest et al.
13 PCR amplifications were carried out as follows: mGluR6, 0.5 μL DNA per 50 μL, annealing temperature 52°C, 30 to 35 cycles; Ceacam, 1 μL DNA per 25 μL annealing temperature 52°C, 35 cycles; TRPM1, 1 μL DNA per 25 μL, annealing temperature 55°C, 40 cycles. All PCR experiments were amplified with β-actin as standard.