Retinal tissue samples were homogenized in 2% (wt/vol) SDS buffer in PBS with mini complete protease inhibitors (Roche, Basel, Switzerland) and centrifuged at 23,000g for 30 minutes. The protein concentration was quantified using the Micro BCA assay (Thermo Scientific, Waltham, MA). The remaining supernatant was mixed with 0.25 volumes of 4 × SDS sample buffer and sonicated for protein denaturation. The samples (20 μg) were run on 10% SDS-PAGE polyacrylamide gels and transferred onto polyvinylidine fluoride (PVDF) membranes (Bio-Rad, Hercules, CA). The PVDF membranes were stained with Fast Green to assess the quality of the transfer and blocked in 3% (wt/vol) BSA in Tris buffered saline, 1% (vol/vol) Tween 20 (TBST) for 1 hour. The membranes were incubated with a mouse monoclonal antibody against mouse Cx36 (37-4600; Invitrogen, Carlsbad, CA) diluted 1:600 in 3% (wt/vol) BSA in TBST overnight at 4°C. Membranes were washed in TBST and incubated with HRP-linked secondary antibody (Abcam, Cambridge, MA) for 1 hour at room temperature. The secondary antibody was detected using an Enhanced Chemiluminescence (ECL) system (Thermo Scientific). The membranes were exposed to X-ray film (Santa Cruz Biotechnology, Santa Cruz, CA) that was developed with standard procedures (Xograph Imaging Systems; Xograph Healthcare, Gloustershire, United Kingdom). After ECL development the membranes were stripped with 50 mM glycine, 1% (vol/vol) SDS, pH2 solution, washed, and blocked as described earlier. To assess gel loading, the stripped blots were incubated with a rabbit polyclonal antibody against β-actin (Abcam), which was detected using a donkey anti-rabbit secondary antibody (Abcam).
Quantity One v.4.5.1 software (Bio-Rad) was used to quantify the Cx36 bands on Western blots. The mean intensity of the Cx36 band was expressed relative to the respective actin mean band intensity. Where a full diurnal or circadian profile of Cx36 expression was assessed, values were normalized to the lowest value in the data set.