Retina sections were blocked by incubation for 30 minutes at
room temperature (RT) in antibody incubation solution (AIS; 0.5%
Triton X-100, 5% horse serum, 0.05% NaN3 in
PBS). Sections were then incubated in the primary antibody diluted in
AIS for either 2 hours or overnight at RT. The sections were washed
three times in PBS and then incubated for 1 hour at RT in the secondary
antibody diluted in AIS. Sections were again washed in PBS and then
coverslipped with Mowiol (Hoechst, Strasbourg, Germany). The following
primary antibodies were used at the indicated dilutions:
anti-α1F (1:103),
anti-pan-α1 (1:50; Alomone Laboratories,
Jerusalem, Israel), and anti-bassoon (1:10; StressGen Biotechnologies
Corp., Victoria, British Columbia, Canada). The following secondary
antibodies were used (all from Jackson ImmunoResearch Laboratories,
West Grove, PA): donkey anti-sheep-IgG coupled to
carboxymethylindocyanine (Cy3; 1:500), goat-anti-rabbit-IgG-Cy3
(1:500), goat-anti-mouse-IgG-Cy3 (1:500), and donkey-anti-sheep-IgG
coupled to fluorescein isothiocyanate (FITC; 1:50). The sections were
analyzed with a confocal laser scanning microscope (model TCS 4D;
Leica, Heidelberg, Germany) outfitted with a ×40 1.4 numerical
aperture oil immersion objective. In the double-labeling experiments,
neither cross-labeling of secondary antibodies nor bleed-through
between the two filter sets was observed. Images of single optical
sections of approximately 0.5-μm thickness were collected and
imported into image analysis software for editing (Adobe Photoshop, San
Jose, CA). Image enhancement was limited to minor adjustments to image
brightness, which were made uniformly over the entire image.