Confirmation of yeast two-hybrid assay results was obtained
using an in vitro binding analysis. Constructs used in the yeast
two-hybrid study were transcribed and translated in vitro with a
coupled transcription–translation system (TnT Quick; Promega, Madison,
WI). Briefly, 40 μl of the master mix, containing T7 RNA polymerase,
nucleotides, salts, RNase inhibitor, and rabbit reticulocyte lysate,
was combined with 30 μCi 35S-methionine
(Amersham), 0.5 μg of each individual plasmid construct, and
distilled water to a final volume of 50 μl. Tubes were incubated at
30°C for 90 minutes and then placed on ice for 2 hours.
Immunoprecipitation was performed using 20 μl of translated products
diluted to 500 μl in modified RIPA buffer (50 mM Tris [pH 8.0], 1%
Triton, 0.1% SDS, 137 mM NaCl, 3 mM KC1, 8 mM
Na2HPO4, l mM
KH2PO4, 75 μg/ml
phenylmethylsulfonyl fluoride [PMSF], and protease inhibitors[
Boehringer Mannheim, Mannheim, Germany]). Samples were incubated
overnight at 4°C with a polyclonal antibody generated to the HA
epitope found on the N-terminal tag of pGADT7-AD–generated proteins
(Clontech). After incubation, protein A-Sepharose was added to each
sample, and immunoprecipitated products were washed three times in
modified RIPA buffer. Pellets were resuspended in 2× Laemmli sample
buffer, boiled, electrophoresed on a 12% SDS-polyacrylamide gel and
transferred to PVDF membrane in 49.6 mM Tris, 384 mM glycine, and
0.01% SDS. Autoradiography was performed by exposing PVDF membrane to
x-ray film (XAR; Kodak) for 4 minutes.
For identification of MYOC binding interactions, Western blot was
processed as previously described.
30 A mouse monoclonal
c-
myc antibody (Clontech) was used as the primary antibody
and anti-mouse Ig conjugated to horseradish peroxidase (Amersham) was
used as the secondary antibody. The antibody–antigen complex was
detected using ECL Western blot signal-detection reagent (Amersham).