The sequencing of the
TYR gene did not show any alteration in any of the 60 individuals with homozygous or compound heterozygous mutations in
CYP1B1 from 19 nonpenetrant families. We identified two coding polymorphisms, one in exon 1 (575C→A, S192Y) and another in exon 4 (1205G→A, R402Q) already described in the Mutation Database of the
TYR Gene (http://www.retina-international.com/sci-news/tyrmut.htm/ provided in the public domain by Retina International’s Scientific Newsletter and maintained by Markus Preising, Molecular Genetics Laboratory. University of Regensberg, Germany).
Table 4shows the observed genotype data for individuals from nonpenetrant families, fully penetrant families, Saudi control subjects, and non-Saudi control subjects. The exon 1 polymorphism showed a similar distribution of alleles in affected individuals, in their nonpenetrant relatives, in individuals from fully penetrant Saudi families, and in Saudi control subjects who do not have PCG (18.0%–22.2%;
Table 4 ). This differed significantly from the non-Saudi control subjects, who had a higher frequency of the A allele (
P < 10
−5). The exon 4 polymorphism also showed similar distribution of alleles between affected individuals and their nonpenetrant relatives (9.1%–11.1%), although the frequency of heterozygosity for the variant is slightly higher in the fully penetrant families than in the nonpenetrant (20.0%) ones. Also, this frequency is even higher in the Saudi control subjects, who do not have PCG and in non-Saudi control subjects (38.0%–40.0%;
Table 4 ). Because multiple individuals are included from some families, these are not independent samples. To adjust for this, a weighted average was generated representing one individual randomly selected from each family. These data are shown in
Table 5 . The differences are not statistically significant (χ
2 = 6.49; 3
df ;
P = 0.371). Our sequencing data do not support
TYR as a major modifier of the PCG phenotype in the Saudi population.