Whole cell lysates (WCL, cellular proteins) and conditioned medium (CM, secreted proteins) were collected from cultured HTM cell strains (n = 6) treated with or without TGF-β2 (5 ng/mL) for 4 and 7 days. After treatment, cell lysate samples were extracted using lysis buffer (M-PER + EDTA; Thermo Fisher Scientific, Inc., Rockford, IL) and protease inhibitor cocktail (Pierce Biotechnology, Inc., Rockford, IL). One mL of CM samples also was collected. Bio-Rad Dc protein Lowry assay kit (Bio-Rad Laboratories, Hercules, CA) was used to estimate cell lysate protein concentrations. Laemmli Buffer (1:6; Boston Bioproducts, Worcester, MA) was added to 30 μg cell lysate and 30 μL CM, and samples were boiled for 5 minutes followed by separation using 10% SDS-PAGE. To verify equal loading for CM samples, gels were stained with Gel Code Blue Stain Reagent (Thermo Fisher Scientific, Inc.; data not shown). Proteins from electrophoresed gels were transferred to PVDF membranes (Millipore, Bedford, MA) and membranes were blocked to prevent nonspecific binding with 5% milk in Tris-buffered saline tween-20 buffer (TBST). Membranes were immunolabeled overnight at 4°C with primary antibodies diluted in SuperBlock (Thermo Fisher Scientific, Inc.): rabbit-anti-FN (1:1000, ab1945; Chemicon, Temecula, CA), mouse-anti-EDA domain (1:500, clone IST-9, ab6328; Abcam, Cambridge, MA), and mouse-anti-β actin (1:5000, clone C4; Millipore). The rabbit-anti-FN antibody recognizes epitopes on the N-terminus of FN, which are expressed by all FN isoforms. Unfortunately, no commercially available antibody was available for the EDB isoform. Blots were incubated for 1 hour with corresponding secondary antibodies diluted in TBST: goat-anti-rabbit or goat-anti-mouse-horseradish peroxidase conjugated antibodies (1:10,000; Pierce Biotechnology, Inc.). Immunolabeled signals were developed using Super Signal West Dura ECL Chemiluminescence Detection kits (Pierce Biotechnology, Inc.), and blot images were acquired using a FluorChem 8900 Image System (Alpha Innotech, San Leandro, CA). Duplicate immunoblots were run for each sample, and each immunoblot was evaluated for either the EDA or the total FN isoforms.
Densitometry analysis of Western immunoblots was used to determine changes in protein content after treatment for each HTM cell strain tested (3 NTM and 3 GTM cell strains). In brief, band intensities of the EDA isoform, and total FN from WCL and CM samples, as well as corresponding β-actin bands (loading control for lysate samples) were measured using ImageJ software (National Institutes of Health, Bethesda, MD). For WCL samples, EDA isoform and total FN densitometry values were normalized against their corresponding internal loading control band value (β-actin). To determine changes in protein content after TGF-β2 treatment for each normalized WCL and CM samples, the relative fold change of treated over corresponding untreated control densitometry values were calculated. Data are presented as the average of the combined HTM cell relative fold change of EDA isoform and total FN isoforms after TGF-β2 treatment compared to the untreated controls.