Flow cytometry was undertaken with a Dako Cyan ADP High Performance flow cytometer (Beckman Coulter, High Wycombe, UK). Multicolor cytometry compensation was performed using cells or compensation beads individually stained with each fluorochrome conjugated antibody in order to circumvent spectral overlap by adjusting for false positives from other fluorochromes. Analysis was undertaken with Kaluza for Windows (Beckman Coulter, Brea, CA, USA).
To characterize the cellular profile of the conjunctival ocular surface, nine color flow cytometry panels were developed. Commercially available antibodies to cell surface markers were employed, including mouse anti-human leukocyte markers CD45 (allophycocyanin or phycoerythrin), CD3 (AlexaFluor 780) (Ebioscience, Hatfield, UK), CD8α (Pacific Orange) (Invitrogen, Paisley, UK) or CD8β (PE Texas Red) (Beckman Coulter, High Wycombe, UK), CD56 (PE Cy7) (Biolegend, Cambridge, UK); memory markers including CD45RO (FITC), CD45RA (PE Texas Red) (Beckman Coulter, High Wycombe, UK), CCR7 (FITC) (R&D Systems, Abingdon, UK), and the homing markers αE (CD103) (FITC) (Dako, Ely, UK) and β7 (PE Cy5) (BD, Oxford, UK). All antibodies were titrated to predetermine optimal concentrations for multicolor staining. Appropriate panels were applied to cells recovered from conjunctival OSIC or peripheral blood.
Cells (100 μL, with a cell count per well ranging from 2 × 105 to 1 × 106 for leukocytes) or 20 μL positive and negative compensation beads were placed in a 96-well plate. Cells were centrifuged for 4 minutes at 400g at 4°C; the supernatant was removed and the 96-well plate gently vortexed. Cells were stained with surface marker antibodies (made up in 50 μL at appropriate dilutions) and incubated on ice in the dark for 20 minutes. One hundred microliters PBS/0.5% BSA was added to each well prior to further centrifugation and removal of supernatant. Cells were resuspended in 295 μL fluorescence-activated cell sorting (FACS) buffer and 5 μL counting beads prior to analysis. For dead cell exclusion, 30 μL Sytox blue (Invitrogen) was added to the stained cells at a concentration of 1/800 and incubated for 5 minutes immediately prior to running on the flow cytometer.