svOCT images of human subjects were acquired using a graphics-processing unit (GPU)-accelerated svOCT clinical prototype machine.
34,38 Details of the acquisition system have previously been published.
35 The OCT system was based on a 1060-nm swept source with 100 kHz A-scan rate (Axsun Technologies, Inc., Billerica, MA, USA) and 500 mega samples per second digitizer (AlazarTech, Inc., Pointe-Claire, QC, Canada). The light source spectrum had a full-width half-maximum (FWHM) bandwidth of 61.5 nm, which corresponded to a coherence length of ∼6 μm in tissue. Sample arm optics were configured to deliver a beam of ∼1.5-mm diameter at the subject's pupil, with the fast axis of galvanometer-mounted mirrors (6210H; Cambridge Technology, Inc., Bedford, MA, USA) oriented for a vertical scan. The size of the focal waist on the retina was estimated to be
ωo = ∼7.3 μm (calculated using Gaussian optics), using the Gullstrand-LeGrand model of the human eye,
39,40 corresponding to a lateral FWHM of ∼8.6 μm, calculated as FWHM =
Display Formula
. The scan area was sampled by a 300 × 300 (×3) pixel grid on a ∼1- × 1-mm field (corresponding to ∼3.3 μm between A-scans) of view in ∼ 3.15 seconds. Patient alignment was performed using a wider field, high speed, low-resolution en face imaging mode with the OCT system, providing visual targets to guide the subject's fixation so that the center of the scan area was ∼3 mm superior to the optic nerve head (ONH). These intensity-only OCT intensity images were not saved. The larger vessels provided landmarks for the acquisition of the ∼1- × 1-mm
2 svOCT data at this location. In order to have data suitable for accurate capillary analysis, the svOCT data were saved in a region avoiding large blood vessels. For the sv calculation, three repeat acquisitions at each B-scan location were acquired. En face visualization of the retinal microvasculature was processed and displayed in real-time using our open-source svOCT code program developed for GPU.
34 The GPU software permitted dynamic selection of the retinal layers used for generating the en face svOCT image. Real-time processing to improve the svOCT image quality included brightness and contrast adjustment to eliminate low values of sv, and filtering to remove streak artifacts.
34 In vivo scan dimensions of the retina were calculated using a reduced eye model (single refractive surface),
41 adjusted for the eye length of each participant measured using the IOL Master 500 (Zeiss, Oberkochen, Baden-Württemberg, Germany).Scan dimensions of the retina were calculated as the length of an arc traced by the OCT beam as it was scanned in angle (corrected for Snell's law refraction) assuming a circle of radius equal to the subject's eye length. The index of refraction for eye medium (vitreous) was approximated as
n = ∼1.33. The svOCT en face images were cropped to match the dimensions of the images used for the ex vivo confocal microscopy analysis. Images were acquired from both eyes of 7 patients.