March 2012
Volume 53, Issue 14
Free
ARVO Annual Meeting Abstract  |   March 2012
Automated Segmentation of Fluid Regions In Choroidal Neovascularization In SD-OCT
Author Affiliations & Notes
  • Milan Sonka
    Electrical & Computer Engineering, University of Iowa, Iowa City, Iowa
    Ophthalmology & Visual Sciences, Univ of Iowa Hospitals & Clinics, Iowa City, Iowa
  • Xinjian Chen
    Electrical & Computer Engineering, University of Iowa, Iowa City, Iowa
  • Meindert Niemeijer
    Ophthalmology & Visual Sciences, Univ of Iowa Hospitals & Clinics, Iowa City, Iowa
  • Li Zhang
    Electrical & Computer Engineering, University of Iowa, Iowa City, Iowa
  • Kyungmoo Lee
    Electrical & Computer Engineering, University of Iowa, Iowa City, Iowa
  • Mona K. Garvin
    Electrical & Computer Engineering, University of Iowa, Iowa City, Iowa
  • Andreas Wahle
    Electrical & Computer Engineering, University of Iowa, Iowa City, Iowa
  • Stephen R. Russell
    Ophthalmology & Visual Sciences, Univ of Iowa Hospitals & Clinics, Iowa City, Iowa
  • James C. Folk
    Ophthalmology & Visual Sciences, Univ of Iowa Hospitals & Clinics, Iowa City, Iowa
  • Michael D. Abramoff
    Electrical & Computer Engineering, University of Iowa, Iowa City, Iowa
    Ophthalmology & Visual Sciences, Univ of Iowa Hospitals & Clinics, Iowa City, Iowa
  • Footnotes
    Commercial Relationships  Milan Sonka, Patent/University of Iowa (P); Xinjian Chen, None; Meindert Niemeijer, None; Li Zhang, None; Kyungmoo Lee, None; Mona K. Garvin, Patent/University of Iowa (P); Andreas Wahle, None; Stephen R. Russell, None; James C. Folk, None; Michael D. Abramoff, Patent/University of Iowa (P)
  • Footnotes
    Support  NIH grants R01 EY018853, R01 EY019112, R01 EB004640
Investigative Ophthalmology & Visual Science March 2012, Vol.53, 4085. doi:
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    • Get Citation

      Milan Sonka, Xinjian Chen, Meindert Niemeijer, Li Zhang, Kyungmoo Lee, Mona K. Garvin, Andreas Wahle, Stephen R. Russell, James C. Folk, Michael D. Abramoff; Automated Segmentation of Fluid Regions In Choroidal Neovascularization In SD-OCT. Invest. Ophthalmol. Vis. Sci. 2012;53(14):4085.

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      © ARVO (1962-2015); The Authors (2016-present)

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Abstract
 
Purpose:
 

Intraretinal and subretinal fluids are one of the primary parameters guiding anti-VEGF injection treatment of patients with choroidal neovascularization (CNV). We report performance evaluation of our new automated method for segmenting fluid and associated abnormalities in the retina, so-called Symptomatic Exudate Associated Derangements (SEADs).

 
Methods:
 

Treated eyes of 10 subjects undergoing anti-VEGF injections were imaged using SD-OCT (Zeiss, 200×1024×200 voxels, 30.0×2.0×30.0µm/voxel). A retinal specialist manually segmented the intra- and sub-retinal fluid in each slice of each eye using Truthmarker software on iPad (Fig. b green).Our SEAD segmentation method started with segmenting the retinal layers and detecting SEAD footprints using our previously reported approach [1]. A surface was fitted to the RPE layer while ignoring locations within the SEAD footprint, this fitted surface was used to flatten the original OCT images. Once flattened; a voxel classification based method was applied to get the approximate SEAD regions in 3D (Fig. a). Employed features features included Gaussian derivatives at various scales describing texture, structure features of Hessian eigenvalues at various scales, and locational features derived from the computed distance to certain layers of the layer segmentation. In the final segmentation step (Fig. b red)., a probability-constrained graph cut method was employed that used the approximate SEAD segmentation as the source and background seeds; and integrated the other features into the graph cut cost function as probability constraints. A leave-one-out strategy was used to evaluate the performance of the automated SEAD segmentation approach. The true positive volume fraction (TPVF) and false positive volume fraction (FPVF) were used as performance indices.

 
Results:
 

The average TPVF and FPVF between the automatically segmented SEAD region and the expert-traced independent standard were 85.1% and 2.5%, respectively.

 
Conclusions:
 

Automated fluid segmentation is reported that has a comparable performance to a human expert. Our approach has the potential to improve the management of patients with CNV.[1] Quellec, G. et al.: IEEE Trans Med Im, 29 (6), 2010, 1321 - 1330.  

 
Keywords: age-related macular degeneration • imaging/image analysis: clinical • neovascularization 
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