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L. Goodwin Burgess, Karan Uppal, Douglas I. Walker, Rachel M. Roberson, ViLinh Tran, Megan B. Parks, Emily A. Wade, Alexandra T. May, Allison C. Umfress, Kelli L. Jarrell, Brooklyn O. C. Stanley, John Kuchtey, Rachel W. Kuchtey, Dean P. Jones, Milam A. Brantley; Metabolome-Wide Association Study of Primary Open Angle Glaucoma. Invest. Ophthalmol. Vis. Sci. 2015;56(8):5020-5028. doi: https://doi.org/10.1167/iovs.15-16702.
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To determine if primary open-angle glaucoma (POAG) patients can be differentiated from controls based on metabolic characteristics.
We used ultra-high resolution mass spectrometry with C18 liquid chromatography for metabolomic analysis on frozen plasma samples from 72 POAG patients and 72 controls. Metabolome-wide Spearman correlation was performed to select differentially expressed metabolites (DEM) correlated with POAG. We corrected P values for multiple testing using Benjamini and Hochberg false discovery rate (FDR). Hierarchical cluster analysis (HCA) was used to depict the relationship between participants and DEM. Differentially expressed metabolites were matched to the METLIN metabolomics database; both DEM and metabolites significantly correlating with DEM were analyzed using MetaboAnalyst to identify metabolic pathways altered in POAG.
Of the 2440 m/z (mass/charge) features recovered after filtering, 41 differed between POAG cases and controls at FDR = 0.05. Hierarchical cluster analysis revealed these DEM to associate into eight clusters; three of these clusters contained the majority of the DEM and included palmitoylcarnitine, hydroxyergocalciferol, and high-resolution METLIN matches to sphingolipids, other vitamin D-related metabolites, and terpenes. MetaboAnalyst also indicated likely alteration in steroid biosynthesis pathways.
Global ultrahigh resolution metabolomics emphasized the importance of altered lipid metabolism in POAG. The results suggest specific metabolic processes, such as those involving palmitoylcarnitine, sphingolipids, vitamin D-related compounds, and steroid precursors, may contribute to POAG status and merit more detailed study with targeted methods.
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