Infrared data analysis was then performed with commercial software (Galactic Industries). The frequency of the CH
2 symmetric CH
2 stretching band near (2850 cm
−1) was used to estimate the content of
trans and
gauche rotamers in the hydrocarbon chains. Although the 2954 cm
−1 asymmetric CH
2 stretching band is useful for measuring phase-transition parameters, we chose to use the 2850 cm
−1 band rather than the band near 2954 cm
−1, because measurement of the asymmetric band frequency is complicated by the adjacent CH
3 symmetric stretching band near 2955 cm
−1 and the CH
2 symmetric stretching band near 2852 cm
−1. The symmetric stretch was calculated by first baseline leveling the OH-CH stretching region between 3500 and 2700 cm
−1. The center of mass of the CH
2 symmetric stretching band,
Ν̃sym, was calculated by integrating the top 10% of the intensity of the band. The baseline for integrating the top 10% of the intensity of the band was parallel to the OH-CH region baseline. Lipid CH
2 groups in the hydrocarbon chains are present as
gauche rotamers, prevalent in disordered hydrocarbon chains, or
trans rotamers, more abundant in ordered hydrocarbon chains. Thus, lipid hydrocarbon chain order may be evaluated in terms of the relative amount of CH
2 trans rotamers. The frequency of the CH
2 symmetric stretch is dependent on the amount of
trans or
gauche rotamers
58,59 and has been used to characterize lipid phase transitions and to measure the
trans rotamer content of lipid hydrocarbon chains with changes in temperature.
60–62 Since rotamers are either in
trans or
gauche conformations, phase transitions can be described by a two-state sigmoidal equation, as described by Borchman et al.
60 Lipid order at 33.4°C was calculated by extrapolating the
Ν̃sym at 33.4°C from the fit of the phase transition and then converting
Ν̃sym to the percentage of
trans rotamers, a measure of lipid conformational order.
60–61 The data for percentage of
trans rotamers were used to calculate the phase-transition enthalpy and entropy from the slopes of Arrhenius plots, as described in Borchman et al.
60