All studies performed comply with The George Washington University Medical Center Institutional Animal Care and Use Committee guidelines and with the ARVO Statement for the Use of Animals in Ophthalmic and Vision Research. For all wounding experiments, 7- to 8-week male and female (virgin) mice were used. The mouse SDC1 gene structure was described previously.
52 The SDC1-null mice were bred in house at The George Washington University Animal Facility. BALB/c mice were ordered from Charles River (Frederick, MD, USA). For developmental studies, mice were euthanized at 2, 3, 4, 5, 8, 14, and 16 weeks. For 4, 8, and 16 weeks, both male and female mice were studied. For wounding studies, mice were anesthetized with ketamine/xylazine and a topical anesthetic applied to their ocular surface. For trephine wounds, a 1.5-mm dulled trephine was used to demarcate the wound area. For debridement wounds, the epithelial cells within a 1.5-mm trephine area were removed using a dulled blade. Wounding was bilateral for each wound type. After wounding, erythromycin ophthalmic ointment was applied to the injured cornea and mice were allowed to heal for 1, 2, 3, 4, 7, 14, and 28 days, then euthanized. For trephine studies, an additional time point of 42 days was assessed. The number of mice used for each developmental and injury time point is shown in
Table 1; images of individual corneas are provided in
Supplementary Data. When data show a significant difference in axon density between genotypes in male mice, experiments are repeated using WT and SDC1-null female mice to determine whether their sex contributed to the differences observed. The axon density data presented for WT mice after debridement and trephine injury have been published previously.
14 They are included here to permit us to make quantitative comparisons between WT and SDC1-null axon densities after the same types of injury. For immunofluorescence (IF) studies, tissues were pooled for each time point and wound type and fixed immediately after euthanization in a paraformaldehyde-containing fixative (1x PBS, 1% formaldehyde, 2-mM MgCl
2, 5-mM EGTA, 0.02% NP-40) for 1 hour and 15 minutes at 4°C, followed by two washes for 10 minutes each in 1x PBS containing 0.02% NP40 at room temperature. Tissues were placed in 4:1 methanol:dimethyl sulfoxide (DMSO) for 2 hours at −20°C and then stored in 100% methanol at −20°C until used for whole-mount staining studies.