Paraffin sections were dewaxed, hydrated through graded concentrations of alcohol, and placed in phosphate-buffered saline. Cryosections were prepared after fixation in 4% paraformaldehyde and dehydration in a sucrose gradient. After antigen unmasking and blocking of nonspecific sites, the sections were incubated overnight at 4°C with primary antibodies against immunoglobulin G (IgG; 1:100; Millipore, Temecula, CA, USA), ED1 (1:100; Biosource, Camarillo, CA, USA), antiglial fibrillary acidic protein (GFAP; 1:200; Millipore), and BrdU (1:100; Novocastra, Newcastle upon Tyne, UK), and subsequently with secondary antibodies for 60 minutes at room temperature. The immunoreactivity of IgG was evaluated at a 200× magnification by calculating the integrated optical density with the ImagePro Plus 6.0 software.
20 The number of ED1
+ cells was counted in an area of 400 × 100 μm at 200× magnification. GFAP immunoreactivity was quantified by assigning different grades: grade 1, immunoreactivity in the nerve fiber layer (NFL) and around vessels; grade 2, immunoreactivity in the NFL in an outward tentacle-like pattern, extending toward the inner nuclear layer (INL); grade 3, showing occasional and grade 4, showing extensive GFAP immunoreactivity extending from the NFL to the outer nuclear layer (ONL).
BrdU+ cells were counted on flat-mounted retinas in four central areas near the optic disc and four peripheral areas near the ora serrata (area size, 400 × 200 μm) at 200×. For double labeling, cryosections were incubated with anti-BrdU and primary antibodies against protein NeuN (for RGCs, 1:50; Millipore), ionized calcium-binding adapter molecule 1 (Iba-1, for microglia; 1:200; Wako, Osaka, Japan), recoverin (for cone and rod cells, 1:200; Millipore), SOX9 (for MG and progenitors, 1:200; Millipore), calbindin (for horizontal cells, 1:100; Cell Signaling Technology), and Chx10 (for mature bipolar cells and progenitors, 1:50; Exalpha, Shirley, MA, USA). Double immunopositive cells were counted (400 × 100 μm) at 200× by using a fluorescence microscope (Nikon).