In separate subgroups of mice, anatomic and apparent diffusion coefficient (ADC) MRI data sets were collected; the diffusion sensitizing gradient was set parallel to the optic nerve based on our previous observations that this is a useful direction for detecting changes in the outer retina.
3 In C57BL/6 mice, ADC was first acquired in the dark and then again 15 minutes after turning on the light; each ADC data set takes 10 minutes to collect, so we refer to the mi-point in the ADC collection as 20 minutes of light exposure. For 129S6/SvEvTac mice, we collected ADC data in the dark and again at 13 minutes and 29 minutes (midpoints) after light exposure for a different study. However, we also used the light data herein by averaging these time points to estimate the ADC at 21 minutes of light. Anatomic images were acquired using a spin-echo sequence (slice thickness, 600 μm; TR, 1000 ms; TE, 11 ms; matrix size, 192 × 320; field of view, 8 × 8 mm
2; number of acquisitions (NA), 2; axial resolution for central retina, 25 μm). Images sensitized to water diffusion were collected (TR, 1000 ms; slice thickness, 600 μm; TE, 33 ms; matrix size, 174 × 288; field of view, 8 × 8 mm
2; axial resolution for central retina, 27.8 μm; b = 0, 100, 250, 500, 600, 750, 990 s/mm
2 [collected in pseudo-random order, NA 1 per b value]), registered to the anatomic image, and analyzed (using in-house code) to generate ADC profiles from the central retina. We have previously established that the present resolution in the central retina is sufficient for extracting meaningful changes in central retinal thickness on the anatomic images and significant ADC changes at 88% to 100% depth, as previously discussed.
2,4,28 Data, largely free of choroidal contamination, were thus analyzed as described in detail in prior publications.
4