June 2021
Volume 62, Issue 8
Open Access
ARVO Annual Meeting Abstract  |   June 2021
Validation of a novel artificial intelligence (AI) machine learning algorithm for quantification of vascular pathology in preclinical models
Author Affiliations & Notes
  • Jonas Jarutis
    Research and Development Division, Experimentica Ltd, Vilnius, Lithuania
    Institute of Applied Mathematics, Vilniaus Universitetas Matematikos ir Informatikos Fakultetas, Vilnius, Vilnius, Lithuania
  • Simas Bijeikis
    Research and Development Division, Experimentica Ltd, Vilnius, Lithuania
  • Symantas Ragauskas
    Research and Development Division, Experimentica Ltd, Vilnius, Lithuania
  • Kernius Mickevicius
    Research and Development Division, Experimentica Ltd, Vilnius, Lithuania
  • Giedrius Kalesnykas
    Experimentica Ltd, Kuopio, Finland
  • Marc Cerrada-Gimenez
    Experimentica Ltd, Kuopio, Finland
  • Simon Kaja
    Research and Development Division, Experimentica Ltd, Vilnius, Lithuania
    Ophthalmology and Molecular Pharmacology and Neuroscience, Loyola University Chicago, Chicago, Illinois, United States
  • Nerija Kvietkauskiene
    Research and Development Division, Experimentica Ltd, Vilnius, Lithuania
  • Footnotes
    Commercial Relationships   Jonas Jarutis, Experimentica Ltd. (E), Experimentica Ltd. (F); Simas Bijeikis, Experimentica Ltd. (F), Experimentica Ltd. (E); Symantas Ragauskas, Experimentica Ltd. (P), Experimentica Ltd. (R), Experimentica Ltd. (I), Experimentica Ltd. (E), Experimentica Ltd. (S), Experimentica Ltd. (F); Kernius Mickevicius, Experimentica Ltd. (F), Experimentica Ltd. (E); Giedrius Kalesnykas, Experimentica Ltd. (I), Experimentica Ltd. (P), Experimentica Ltd. (R), Experimentica Ltd. (E), Experimentica Ltd. (S), Experimentica Ltd. (F), Spouse -Experimentica Ltd. (I); Marc Cerrada-Gimenez, Experimentica Ltd. (F), Experimentica Ltd. (E); Simon Kaja, Experimentica Ltd. (F), Experimentica Ltd. (I), Experimentica Ltd. (P), Experimentica Ltd. (R), Experimentica Ltd. (S), eyeNOS Inc (P), K&P Scientific LLC (F), K&P Scientific LLC (I), K&P Scientific LLC (R), K&P Scientific LLC (S); Nerija Kvietkauskiene, Experimentica Ltd. (F), Experimentica Ltd. (E)
  • Footnotes
    Support  Lithuanian Business Support Agency (project no. J05-LVPA-K-04-0009) and Business Finland (Young Innovative Company award).
Investigative Ophthalmology & Visual Science June 2021, Vol.62, 2718. doi:
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      Jonas Jarutis, Simas Bijeikis, Symantas Ragauskas, Kernius Mickevicius, Giedrius Kalesnykas, Marc Cerrada-Gimenez, Simon Kaja, Nerija Kvietkauskiene; Validation of a novel artificial intelligence (AI) machine learning algorithm for quantification of vascular pathology in preclinical models. Invest. Ophthalmol. Vis. Sci. 2021;62(8):2718.

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      © ARVO (1962-2015); The Authors (2016-present)

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Abstract

Purpose : To validate a novel artificial intelligence (AI) machine learning algorithm for the automated quantification of lesion size in the mouse choroidal neovascularization (CNV) model.

Methods : CNV was induced in male C57Bl/6JRj mice using a diode laser. The progression of CNV was monitored using live in vivo imaging: fluorescent angiography and spectral-domain optical coherence tomography (SD-OCT). SD-OCT scans covering the whole retina were analyzed by a proprietary algorithm, which uses a combination of convolutional neural network (CNN) and traditional computer vision algorithms. The neural network was trained to recognize and quantify CNV lesions using a transfer learning approach.

Results : We used the Dice coefficient to evaluate AI algorithm-derived results. Dice coefficient comparing predicted lesion volume with volume from the manually annotated data was 0.87 and 0.89 for follow-up day 3 and day 7, correspondingly.

Conclusions : Our data provide evidence that our novel AI algorithm can successfully detect and quantify CNV lesions in the mouse CNV model. Notably, the algorithm accurately recognized temporal changes in retinal structure and pathology over a one-week experimental period. Automated vs. manual analysis resulted in approx. 90% congruence. The novel AI algorithm will provide automated computational analysis of phenotypes in the commonly-used CNV model for age-related macular degeneration, and offer complementary quantitative and bias-free data to accelerate and support drug discovery efforts.

This is a 2021 ARVO Annual Meeting abstract.

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